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Gene : TCP4 A. thaliana

DB identifier  ? AT3G15030 Secondary Identifier  ? locus:2086350
Name  ? TCP family transcription factor 4 Brief Description  TCP family transcription factor 4
TAIR Computational Description  TCP family transcription factor 4;(source:Araport11)
TAIR Curator Summary  Arabidopsis thaliana TCP family transcription factor. Regulated by miR319. Involved in heterchronic regulation of leaf differentiation. Promotes hypocotyl elongation when hyperactivated. Enhance hypocotyl cell elongation by directly activating YUC5.
TAIR Short Description  TCP family transcription factor 4
TAIR Aliases  MEE35, PCF4, TCP4

20 Gene Rifs

1 Organism

53 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2472  
Location: Chr3:5061681-5064152

Gene models - TCP4 AT3G15030

? Gene models

Transcripts: 4  Exons: 11  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

11 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
TCP4_ARATH developmental stage Expressed in cotyledons during embryogenesis. Expressed during ovule development (PubMed:25378179).
TCP4_ARATH function Transcription factor playing a pivotal role in the control of morphogenesis of shoot organs by negatively regulating the expression of boundary-specific genes such as CUC genes, probably through the induction of miRNA (e.g. miR164) (PubMed:12931144, PubMed:17307931). Required during early steps of embryogenesis (PubMed:15634699). Participates in ovule develpment (PubMed:25378179). Activates LOX2 expression by binding to the 5'-GGACCA-3' motif found in its promoter (PubMed:12931144, PubMed:15634699, PubMed:17307931, PubMed:18816164, PubMed:25378179). Activates YUC5 transcription by binding to the 5'-GTGGGCCA-3' motif found in its promoter (PubMed:27597774). Through the activation of YUC5 transcription, integrates the auxin response to a brassinosteroid-dependent molecular circuit that promotes cell elongation in hypocotyls (PubMed:27597774). Activates GIS transcription by binding to the 5'-TGGTCC-3' motif found in its promoter (PubMed:29165850). Involved in the regulation of trichome branching through the activation of GIS transcription (PubMed:29165850). Activates CO transcription by binding to the 5'-GGACCAC-3' motif found in its promoter (PubMed:28628608). Involved in the regulation of photoperiodic flowering through the activation of CO transcription (PubMed:28628608). Activates TCL1 and TCL2 transcription by binding to the 5'-TGGCCA-3' and 5'-GTGGACCA-3' motifS found in their respective promoters (PubMed:31575625). Involved in the suppression of trichome initiaition through the activation of TCL1 and TCL2 transcription (PubMed:31575625). Activates HAT2 transcription by binding to the 5'-TGGTCCAC-3' motif found in its promoter (PubMed:30742619). Through the activation of HAT2 transcription, involved in the auxin-independent reprogramming of mitotic cells to exit division and acquire differentiation competence within the transition zone (PubMed:30742619).
TCP4_ARATH tissue specificity Expressed in cotyledons, particularly in the vascular region, in leaves, roots, buds, flowers and immature siliques.

1 Proteins

Function

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Expression

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Co-expression

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Data Source: ATTED-II
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LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets