External Links
- Aracyc
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- Plant Proteome Database
- SUBA
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- GeneVisible
- ABRC
- TAIR
- EnsemblPlants
- PGDD
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- Plaza
- pep2pro
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- PIR
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- Agrisera Antibodies
- ATTED-II
- T-DNA Express
- AtGenExpress
- AthaMap
- Phytozome
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G13062:CDS:1 | 233 | Chr3: 4184777-4185009 | Arabidopsis thaliana |
AT3G13062:CDS:2 | 148 | Chr3: 4185211-4185358 | Arabidopsis thaliana |
AT3G13062:CDS:4 | 261 | Chr3: 4185464-4185724 | Arabidopsis thaliana |
AT3G13062:CDS:5 | 82 | Chr3: 4185927-4186008 | Arabidopsis thaliana |
AT3G13062:CDS:6 | 197 | Chr3: 4186168-4186364 | Arabidopsis thaliana |
AT3G13062:CDS:8 | 291 | Chr3: 4186505-4186795 | Arabidopsis thaliana |
AT3G13062:CDS:1.1 | 233 | Chr3: 4184777-4185009 | Arabidopsis thaliana |
AT3G13062:CDS:3 | 172 | Chr3: 4185211-4185382 | Arabidopsis thaliana |
AT3G13062:CDS:4.1 | 261 | Chr3: 4185464-4185724 | Arabidopsis thaliana |
AT3G13062:CDS:5.1 | 82 | Chr3: 4185927-4186008 | Arabidopsis thaliana |
AT3G13062:CDS:6.1 | 197 | Chr3: 4186168-4186364 | Arabidopsis thaliana |
AT3G13062:CDS:8.1 | 291 | Chr3: 4186505-4186795 | Arabidopsis thaliana |
AT3G13062:CDS:1.2 | 233 | Chr3: 4184777-4185009 | Arabidopsis thaliana |
AT3G13062:CDS:2.1 | 148 | Chr3: 4185211-4185358 | Arabidopsis thaliana |
AT3G13062:CDS:4.2 | 261 | Chr3: 4185464-4185724 | Arabidopsis thaliana |
AT3G13062:CDS:5.2 | 82 | Chr3: 4185927-4186008 | Arabidopsis thaliana |
AT3G13062:CDS:6.2 | 197 | Chr3: 4186168-4186364 | Arabidopsis thaliana |
AT3G13062:CDS:7 | 283 | Chr3: 4186505-4186787 | Arabidopsis thaliana |
AT3G13062:CDS:9 | 119 | Chr3: 4187150-4187268 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G13062:exon:1 | 670 | Chr3: 4184340-4185009 | Arabidopsis thaliana |
AT3G13062:exon:10 | 618 | Chr3: 4186505-4187122 | Arabidopsis thaliana |
AT3G13062:exon:4 | 172 | Chr3: 4185211-4185382 | Arabidopsis thaliana |
AT3G13062:exon:9 | 580 | Chr3: 4186505-4187084 | Arabidopsis thaliana |
AT3G13062:exon:2 | 441 | Chr3: 4184569-4185009 | Arabidopsis thaliana |
AT3G13062:exon:3 | 148 | Chr3: 4185211-4185358 | Arabidopsis thaliana |
AT3G13062:exon:5 | 261 | Chr3: 4185464-4185724 | Arabidopsis thaliana |
AT3G13062:exon:6 | 82 | Chr3: 4185927-4186008 | Arabidopsis thaliana |
AT3G13062:exon:7 | 197 | Chr3: 4186168-4186364 | Arabidopsis thaliana |
AT3G13062:exon:8 | 283 | Chr3: 4186505-4186787 | Arabidopsis thaliana |
AT3G13062:exon:11 | 304 | Chr3: 4187150-4187453 | Arabidopsis thaliana |
AT3G13065:exon:1 | 233 | Chr3: 4187371-4187603 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G13062:five_prime_UTR:1 | 437 | Chr3: 4184340-4184776 | Arabidopsis thaliana |
AT3G13062:five_prime_UTR:2 | 208 | Chr3: 4184569-4184776 | Arabidopsis thaliana |
AT3G13065:five_prime_UTR:1 | 139 | Chr3: 4187371-4187509 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT3G13065 | locus:2089210 | SRF4 | STRUBBELIG-receptor family 4 | 3928 | Chr3: 4187371-4191298 | A. thaliana | STRUBBELIG-receptor family 4;(source:Araport11) | NULL | STRUBBELIG-receptor family 4 | SRF4 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT3G13062.1 | 1976 | Chr3: 4184340-4187122 |
AT3G13062.3 | 1733 | Chr3: 4184569-4187084 |
AT3G13062.2 | 1716 | Chr3: 4184569-4187453 |
AT3G13065.1 | 2638 | Chr3: 4187371-4191298 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT3G13062:three_prime_UTR:2 | 327 | Chr3: 4186796-4187122 | Arabidopsis thaliana |
AT3G13062:three_prime_UTR:1 | 289 | Chr3: 4186796-4187084 | Arabidopsis thaliana |
AT3G13062:three_prime_UTR:3 | 185 | Chr3: 4187269-4187453 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
membrane | ECO |
molecular function | |
lipid binding | ECO |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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