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Gene : TLP9 A. thaliana

DB identifier  ? AT3G06380 Secondary Identifier  ? locus:2081101
Name  ? tubby-like protein 9 Brief Description  tubby-like protein 9
TAIR Computational Description  tubby-like protein 9;(source:Araport11)
TAIR Curator Summary  Member of plant TLP family which differs in having an F box domain. Interacts with ASK proteins.Plasma membrane tethering is mediated by PIP2 binding domain. Mutants are insensitive to ABA. May act redundantly with its paralog TPL3.
TAIR Short Description  tubby-like protein 9
TAIR Aliases  ATTLP9, TLP9

1 Gene Rifs

1 Organism

13 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2208  
Location: Chr3:1936050-1938257

Gene models - TLP9 AT3G06380

? Gene models

Transcripts: 2  Exons: 9  Introns: 7 

Overlapping Features

? Genome features that overlap coordinates of this Gene

9 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
TLP9_ARATH developmental stage Expressed early during seed germination, especially in the preemergent radicle.
TLP9_ARATH function Component of SCF(ASK-cullin-F-box) E3 ubiquitin ligase complexes, which may mediate the ubiquitination and subsequent proteasomal degradation of target proteins. Confers sensitivity to ABA during seed germination and early seedling development.
TLP9_ARATH pathway Protein modification; protein ubiquitination.
A0A1I9LQ32_ARATH TLP9_ARATH similarity Belongs to the TUB family.
TLP9_ARATH tissue specificity Ubiquitous.

2 Proteins

Function

Gene Ontology

cellular component
plasma membrane  ? ECO  
molecular function
transcription cis-regulatory region binding  ? ECO  
biological process
response to fungus  ? ECO  
protein ubiquitination  ? ECO  
abscisic acid-activated signaling pathway  ? ECO  
regulation of DNA-templated transcription  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets