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Gene : BPM3 A. thaliana

DB identifier  ? AT2G39760 Secondary Identifier  ? locus:2063953
Brief Description  BTB/POZ/MATH-domains containing protein
TAIR Computational Description  BTB/POZ/MATH-domains containing protein;(source:Araport11)
TAIR Curator Summary  Encodes a member of the MATH-BTB domain proteins (BPMs) that directly interact with and target for proteasomal degradation the class I homeobox-leucine zipper (HD-ZIP) transcription factor ATHB6. Known members include AT5G19000 (BPM1), AT3G06190 (BPM2), AT2G39760 (BPM3), AT3G03740 (BPM4), AT5G21010 (BPM5) and AT3G43700 (BPM6).
TAIR Short Description  BTB/POZ/MATH-domains containing protein
TAIR Aliases  ATBPM3, BPM3

0 Gene Rifs

1 Organism

18 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3258  
Location: Chr2:16583003-16586260

Gene models - BPM3 AT2G39760

? Gene models

Transcripts: 4  Exons: 16  Introns: 12 

Overlapping Features

? Genome features that overlap coordinates of this Gene

13 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
BPM3_ARATH BPM3_ARATH-2 function May act as a substrate-specific adapter of an E3 ubiquitin-protein ligase complex (CUL3-RBX1-BTB) which mediates the ubiquitination and subsequent proteasomal degradation of target proteins.
BPM3_ARATH A0A1P8AZW8_ARATH BPM3_ARATH-2 pathway Protein modification; protein ubiquitination.
BPM3_ARATH BPM3_ARATH-2 similarity Belongs to the Tdpoz family.
BPM3_ARATH BPM3_ARATH-2 tissue specificity Ubiquitous.

3 Proteins

Function

Gene Ontology

cellular component
cytosol  ? ECO  
nucleus  ? ECO  
molecular function
identical protein binding  ? ECO  
biological process
regulation of protein ubiquitination  ? ECO  
protein ubiquitination  ? ECO  
response to osmotic stress  ? ECO  
cellular response to salt stress  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets