help  | faq  | software  | BAR
Hide

Oops!

Error: 403

Gene : AtIPCS2 A. thaliana

DB identifier  ? AT2G37940 Secondary Identifier  ? locus:2065629
Name  ? Arabidopsis Inositol phosphorylceramide synthase 2 Brief Description  Inositol phosphorylceramide synthase 2
TAIR Computational Description  Inositol phosphorylceramide synthase 2;(source:Araport11)
TAIR Curator Summary  NULL
TAIR Short Description  Arabidopsis Inositol phosphorylceramide synthase 2
TAIR Aliases  AtIPCS2, ERH1

2 Gene Rifs

1 Organism

15 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3387  
Location: Chr2:15876717-15880103

Gene models - AtIPCS2 AT2G37940

? Gene models

Transcripts: 2  Exons: 25  Introns: 23 

Overlapping Features

? Genome features that overlap coordinates of this Gene

17 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
IPCS2_ARATH function Catalyzes the transfer of the phosphorylinositol group from phosphatidylinositol (PI) to phytoceramide, an essential step in sphingolipid biosynthesis (PubMed:19001565, PubMed:20309609). May play an important role in modulating plant programmed cell death (PCD) associated with defense (e.g. toward Golovinomyces cichoracearum) by promoting sphingolipid metabolism and thus regulating ceramide accumulation (PubMed:19001565).
IPCS2_ARATH pathway Sphingolipid metabolism.
IPCS2_ARATH similarity Belongs to the sphingomyelin synthase family.
IPCS2_ARATH tissue specificity Expressed in leaves, roots, stems, flowers and siliques.

1 Proteins

Function

Gene Ontology

cellular component
trans-Golgi network  ? ECO  
membrane  ? ECO  
molecular function
phosphotransferase activity, for other substituted phosphate groups  ? ECO  
inositol phosphoceramide synthase activity  ? ECO  
biological process
defense response  ? ECO  
sphingolipid biosynthetic process  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets