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Genomics
Genome feature
| Region: |
gene
|
Length: |
7767
 |
| Location: | Chr2:10541727-10549493 reverse strand | ||
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNAs: 4, Exons: 14, mRNA: 1, Pseudogene: 1, Pseudogenic Exon: 1, Pseudogenic Transcript: 1, Transposable Elements: 4, Transposable Element Gene: 1, Transposon Fragments: 4
Antisense lncRNAs
| DB identifier | Length | Chromosome Location |
|---|---|---|
| AT2G24755.1 |
4946
|
Chr2: 10541727-10546672 |
| AT2G24755.2 |
1784
|
Chr2: 10541738-10549434 |
| AT2G24755.3 |
4780
|
Chr2: 10542465-10549445 |
| AT2G24755.4 |
2303
|
Chr2: 10546748-10549493 |
Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT2G24755:exon:13 |
4946
|
Chr2: 10541727-10546672 | Arabidopsis thaliana |
| AT2G24755:exon:12 |
269
|
Chr2: 10541738-10542006 | Arabidopsis thaliana |
| AT2G24755:exon:8 |
225
|
Chr2: 10547687-10547911 | Arabidopsis thaliana |
| AT2G24755:exon:6 |
337
|
Chr2: 10548002-10548338 | Arabidopsis thaliana |
| AT2G24755:exon:3 |
732
|
Chr2: 10548703-10549434 | Arabidopsis thaliana |
| AT2G24755:exon:11 |
3217
|
Chr2: 10542465-10545681 | Arabidopsis thaliana |
| AT2G24755:exon:9 |
113
|
Chr2: 10547440-10547552 | Arabidopsis thaliana |
| AT2G24755:exon:2 |
743
|
Chr2: 10548703-10549445 | Arabidopsis thaliana |
| AT2G24755:exon:10 |
805
|
Chr2: 10546748-10547552 | Arabidopsis thaliana |
| AT2G24755:exon:7 |
230
|
Chr2: 10547687-10547916 | Arabidopsis thaliana |
| AT2G24755:exon:5 |
369
|
Chr2: 10548002-10548370 | Arabidopsis thaliana |
| AT2G24755:exon:4 |
108
|
Chr2: 10548447-10548554 | Arabidopsis thaliana |
| AT2G24755:exon:1 |
791
|
Chr2: 10548703-10549493 | Arabidopsis thaliana |
| AT2G24760:exon:1 |
2495
|
Chr2: 10547026-10549520 | Arabidopsis thaliana |
Pseudogenes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT2G24750 | locus:2047271 | AT2G24750 |
6985
|
Chr2: 10539001-10545985 | A. thaliana | pseudogene of glutamate receptor 2.2;(source:Araport11) | NULL | NULL |
Pseudogenic Exons
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT2G24750:pseudogenic_exon:1 |
6985
|
Chr2: 10539001-10545985 | Arabidopsis thaliana |
Pseudogenic Transcripts
| DB identifier | Length | Chromosome Location |
|---|---|---|
| AT2G24750.1 | 6985 | Chr2: 10539001-10545985 |
Transposable Elements
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT2TE45250 |
747
|
Chr2: 10541093-10541839 | Arabidopsis thaliana |
| AT2TE45270 |
155
|
Chr2: 10546132-10546286 | Arabidopsis thaliana |
| AT2TE45275 |
667
|
Chr2: 10546287-10546953 | Arabidopsis thaliana |
| AT2TE45280 |
2495
|
Chr2: 10547026-10549520 | Arabidopsis thaliana |
Transposable Element Genes
| DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
|---|---|---|---|---|---|---|---|---|---|---|
| AT2G24760 | locus:2047276 | AT2G24760 |
2495
|
Chr2: 10547026-10549520 | A. thaliana | transposable_element_gene;(source:Araport11);non-LTR retrotransposon family (LINE), has a 4.9e-16 P-value blast match to GB:NP_038605 L1 repeat, Tf subfamily, member 30 (LINE-element) (Mus musculus);(source:TAIR10) | NULL | transposable element gene |
Transposon Fragments
| DB identifier | Length | Chromosome Location |
Organism . Name |
|---|---|---|---|
| AT2TE45250:transposon_fragment:1 |
747
|
Chr2: 10541093-10541839 | Arabidopsis thaliana |
| AT2TE45270:transposon_fragment:1 |
155
|
Chr2: 10546132-10546286 | Arabidopsis thaliana |
| AT2TE45275:transposon_fragment:1 |
667
|
Chr2: 10546287-10546953 | Arabidopsis thaliana |
| AT2TE45280:transposon_fragment:1 |
2495
|
Chr2: 10547026-10549520 | Arabidopsis thaliana |
Function
Gene Ontology
| cellular component | |
|---|---|
| No terms in this category. | |
| molecular function | |
| No terms in this category. | |
| biological process | |
| No terms in this category. |
Interactions
Interaction Network
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