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Gene : cICDH A. thaliana

DB identifier  ? AT1G65930 Secondary Identifier  ? locus:2009759
Name  ? cytosolic NADP -dependent isocitrate dehydrogenase Brief Description  cytosolic NADP -dependent isocitrate dehydrogenase
TAIR Computational Description  cytosolic NADP+-dependent isocitrate dehydrogenase;(source:Araport11)
TAIR Curator Summary  Encodes a NADP+-isocitrate dehydrogenase that is believed to function in the cytosol. It appears to contribute to NADPH production under oxidative stress, and thereby to participate in redox signalling linked to defense responses. The mRNA is cell-to-cell mobile.
TAIR Short Description  cytosolic NADP+-dependent isocitrate dehydrogenase
TAIR Aliases  cICDH

1 Gene Rifs

1 Organism

40 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 3827  
Location: Chr1:24538886-24542712

Gene models - cICDH AT1G65930

? Gene models

Transcripts: 1  Exons: 15  Introns: 14 

Overlapping Features

? Genome features that overlap coordinates of this Gene

16 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ICDHC_ARATH function May supply 2-oxoglutarate for amino acid biosynthesis and ammonia assimilation via the glutamine synthetase/glutamate synthase (GS/GOGAT) pathway. May be involved in the production of NADPH to promote redox signaling or homeostasis in response to oxidative stress, or redox signaling linked to defense responses.
ICDHC_ARATH similarity Belongs to the isocitrate and isopropylmalate dehydrogenases family.

1 Proteins

Function

Gene Ontology

cellular component
plasmodesma  ? ECO  
cytosol  ? ECO  
plasma membrane  ? ECO  
chloroplast stroma  ? ECO  
nucleus  ? ECO  
apoplast  ? ECO  
molecular function
isocitrate dehydrogenase (NADP+) activity  ? ECO  
copper ion binding  ? ECO  
NAD binding  ? ECO  
magnesium ion binding  ? ECO  
biological process
response to zinc ion  ? ECO  
tricarboxylic acid cycle  ? ECO  
isocitrate metabolic process  ? ECO  
defense response to bacterium  ? ECO  
NADP metabolic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets