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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G56310:CDS:1 | 148 | Chr1: 21082863-21083010 | Arabidopsis thaliana |
AT1G56310:CDS:2 | 691 | Chr1: 21083085-21083775 | Arabidopsis thaliana |
AT1G56310:CDS:3 | 85 | Chr1: 21083877-21083961 | Arabidopsis thaliana |
AT1G56310:CDS:4 | 88 | Chr1: 21084072-21084159 | Arabidopsis thaliana |
AT1G56310:CDS:5 | 185 | Chr1: 21084239-21084423 | Arabidopsis thaliana |
AT1G56310:CDS:6 | 133 | Chr1: 21084495-21084627 | Arabidopsis thaliana |
AT1G56310:CDS:7 | 137 | Chr1: 21084719-21084855 | Arabidopsis thaliana |
AT1G56310:CDS:8 | 75 | Chr1: 21084963-21085037 | Arabidopsis thaliana |
AT1G56310:CDS:9 | 111 | Chr1: 21085136-21085246 | Arabidopsis thaliana |
AT1G56310:CDS:10 | 117 | Chr1: 21085448-21085564 | Arabidopsis thaliana |
AT1G56310:CDS:1.1 | 148 | Chr1: 21082863-21083010 | Arabidopsis thaliana |
AT1G56310:CDS:2.1 | 691 | Chr1: 21083085-21083775 | Arabidopsis thaliana |
AT1G56310:CDS:3.1 | 85 | Chr1: 21083877-21083961 | Arabidopsis thaliana |
AT1G56310:CDS:4.1 | 88 | Chr1: 21084072-21084159 | Arabidopsis thaliana |
AT1G56310:CDS:5.1 | 185 | Chr1: 21084239-21084423 | Arabidopsis thaliana |
AT1G56310:CDS:6.1 | 133 | Chr1: 21084495-21084627 | Arabidopsis thaliana |
AT1G56310:CDS:7.1 | 137 | Chr1: 21084719-21084855 | Arabidopsis thaliana |
AT1G56310:CDS:8.1 | 75 | Chr1: 21084963-21085037 | Arabidopsis thaliana |
AT1G56310:CDS:9.1 | 111 | Chr1: 21085136-21085246 | Arabidopsis thaliana |
AT1G56310:CDS:10.1 | 117 | Chr1: 21085448-21085564 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G56310:exon:1 | 82 | Chr1: 21082490-21082571 | Arabidopsis thaliana |
AT1G56310:exon:3 | 173 | Chr1: 21082838-21083010 | Arabidopsis thaliana |
AT1G56310:exon:13 | 204 | Chr1: 21085448-21085651 | Arabidopsis thaliana |
AT1G56310:exon:2 | 199 | Chr1: 21082812-21083010 | Arabidopsis thaliana |
AT1G56310:exon:4 | 691 | Chr1: 21083085-21083775 | Arabidopsis thaliana |
AT1G56310:exon:5 | 85 | Chr1: 21083877-21083961 | Arabidopsis thaliana |
AT1G56310:exon:6 | 88 | Chr1: 21084072-21084159 | Arabidopsis thaliana |
AT1G56310:exon:7 | 185 | Chr1: 21084239-21084423 | Arabidopsis thaliana |
AT1G56310:exon:8 | 133 | Chr1: 21084495-21084627 | Arabidopsis thaliana |
AT1G56310:exon:9 | 137 | Chr1: 21084719-21084855 | Arabidopsis thaliana |
AT1G56310:exon:10 | 75 | Chr1: 21084963-21085037 | Arabidopsis thaliana |
AT1G56310:exon:11 | 111 | Chr1: 21085136-21085246 | Arabidopsis thaliana |
AT1G56310:exon:12 | 117 | Chr1: 21085448-21085564 | Arabidopsis thaliana |
AT1G56320:exon:4 | 287 | Chr1: 21085548-21085834 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G56310:five_prime_UTR:1 | 82 | Chr1: 21082490-21082571 | Arabidopsis thaliana |
AT1G56310:five_prime_UTR:3 | 25 | Chr1: 21082838-21082862 | Arabidopsis thaliana |
AT1G56310:five_prime_UTR:2 | 51 | Chr1: 21082812-21082862 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G56320 | locus:2011811 | AT1G56320 | 952 | Chr1: 21085548-21086499 | A. thaliana | hypothetical protein;(source:Araport11) | NULL | NULL |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G56310.1 | 1964 | Chr1: 21082490-21085651 |
AT1G56310.2 | 1821 | Chr1: 21082812-21085564 |
AT1G56320.1 | 706 | Chr1: 21085548-21086499 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G56310:three_prime_UTR:1 | 87 | Chr1: 21085565-21085651 | Arabidopsis thaliana |
AT1G56320:three_prime_UTR:1 | 174 | Chr1: 21085548-21085721 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
nucleic acid binding | ECO |
transferase activity | ECO |
3'-5' exonuclease activity | ECO |
biological process | |
siRNA processing | ECO |
miRNA catabolic process | ECO |
Interactions
Interaction Network
Show the following interaction types:
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
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