External Links
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Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
Antisense lncRNAs: 7, CDSs: 12, Exons: 21, Five Prime UTRs: 2, Gene: 1, mRNAs: 3, Three Prime UTR: 1
Antisense lncRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G44125.1 | 6453 | Chr1: 16780241-16786828 |
AT1G44125.2 | 6144 | Chr1: 16780241-16786828 |
AT1G44125.3 | 5942 | Chr1: 16780241-16786828 |
AT1G44125.4 | 5734 | Chr1: 16780241-16786828 |
AT1G44125.5 | 6137 | Chr1: 16780241-16786828 |
AT1G44125.6 | 6227 | Chr1: 16780241-16786828 |
AT1G44125.7 | 6302 | Chr1: 16780302-16786821 |
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G44120:CDS:1 | 65 | Chr1: 16780449-16780513 | Arabidopsis thaliana |
AT1G44120:CDS:2 | 3079 | Chr1: 16780594-16783672 | Arabidopsis thaliana |
AT1G44120:CDS:4 | 2554 | Chr1: 16783765-16786318 | Arabidopsis thaliana |
AT1G44120:CDS:5 | 333 | Chr1: 16786389-16786721 | Arabidopsis thaliana |
AT1G44120:CDS:7 | 5 | Chr1: 16786810-16786814 | Arabidopsis thaliana |
AT1G44120:CDS:1.1 | 65 | Chr1: 16780449-16780513 | Arabidopsis thaliana |
AT1G44120:CDS:2.1 | 3079 | Chr1: 16780594-16783672 | Arabidopsis thaliana |
AT1G44120:CDS:4.1 | 2554 | Chr1: 16783765-16786318 | Arabidopsis thaliana |
AT1G44120:CDS:6 | 458 | Chr1: 16786389-16786846 | Arabidopsis thaliana |
AT1G44120:CDS:3 | 3063 | Chr1: 16780610-16783672 | Arabidopsis thaliana |
AT1G44120:CDS:4.2 | 2554 | Chr1: 16783765-16786318 | Arabidopsis thaliana |
AT1G44120:CDS:6.1 | 458 | Chr1: 16786389-16786846 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G44120:exon:6 | 333 | Chr1: 16786389-16786721 | Arabidopsis thaliana |
AT1G44120:exon:8 | 37 | Chr1: 16786810-16786846 | Arabidopsis thaliana |
AT1G44120:exon:1 | 214 | Chr1: 16780059-16780272 | Arabidopsis thaliana |
AT1G44120:exon:2 | 87 | Chr1: 16780427-16780513 | Arabidopsis thaliana |
AT1G44120:exon:3 | 3079 | Chr1: 16780594-16783672 | Arabidopsis thaliana |
AT1G44120:exon:4 | 3063 | Chr1: 16780610-16783672 | Arabidopsis thaliana |
AT1G44120:exon:5 | 2554 | Chr1: 16783765-16786318 | Arabidopsis thaliana |
AT1G44120:exon:7 | 458 | Chr1: 16786389-16786846 | Arabidopsis thaliana |
AT1G44125:exon:7 | 3825 | Chr1: 16783004-16786828 | Arabidopsis thaliana |
AT1G44125:exon:4 | 2144 | Chr1: 16784148-16786291 | Arabidopsis thaliana |
AT1G44125:exon:1 | 454 | Chr1: 16786375-16786828 | Arabidopsis thaliana |
AT1G44125:exon:6 | 439 | Chr1: 16783483-16783921 | Arabidopsis thaliana |
AT1G44125:exon:11 | 194 | Chr1: 16783004-16783197 | Arabidopsis thaliana |
AT1G44125:exon:10 | 597 | Chr1: 16783004-16783600 | Arabidopsis thaliana |
AT1G44125:exon:5 | 231 | Chr1: 16783691-16783921 | Arabidopsis thaliana |
AT1G44125:exon:13 | 2628 | Chr1: 16780241-16782868 | Arabidopsis thaliana |
AT1G44125:exon:9 | 918 | Chr1: 16783004-16783921 | Arabidopsis thaliana |
AT1G44125:exon:3 | 2681 | Chr1: 16784148-16786828 | Arabidopsis thaliana |
AT1G44125:exon:12 | 2567 | Chr1: 16780302-16782868 | Arabidopsis thaliana |
AT1G44125:exon:8 | 3288 | Chr1: 16783004-16786291 | Arabidopsis thaliana |
AT1G44125:exon:2 | 447 | Chr1: 16786375-16786821 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G44120:five_prime_UTR:1 | 214 | Chr1: 16780059-16780272 | Arabidopsis thaliana |
AT1G44120:five_prime_UTR:2 | 22 | Chr1: 16780427-16780448 | Arabidopsis thaliana |
Genes
DB identifier | Secondary Identifier | Symbol | Name | Length | Chromosome Location |
Organism . Short Name |
TAIR Computational Description | TAIR Curator Summary | TAIR Short Description | TAIR Aliases |
---|---|---|---|---|---|---|---|---|---|---|
AT1G44120 | locus:2205866 | AT1G44120 | 7565 | Chr1: 16780059-16787623 | A. thaliana | CELLULOSE SYNTHASE INTERACTIVE 2;(source:Araport11) | NULL | Armadillo/beta-catenin-like repeat ; C2 calcium/lipid-binding domain (CaLB) protein | CSI2 |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G44120.3 | 6783 | Chr1: 16780059-16787623 |
AT1G44120.2 | 6871 | Chr1: 16780059-16787623 |
AT1G44120.1 | 6345 | Chr1: 16780610-16787414 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G44120:three_prime_UTR:1 | 32 | Chr1: 16786815-16786846 | Arabidopsis thaliana |
Function
Gene Ontology
cellular component | |
---|---|
No terms in this category. | |
molecular function | |
No terms in this category. | |
biological process | |
No terms in this category. |
Interactions
Interaction Network
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Expression
Co-expression
Querying ATTED Service...
Data Source: ATTED-II |
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Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.
Waiting for results...