help  | faq  | software  | BAR
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide

Oops!

Error: 403

Gene : ROPGEF14 A. thaliana

DB identifier  ? AT1G31650 Secondary Identifier  ? locus:2028701
Name  ? ROP (rho of plants) guanine nucleotide exchange factor 14 Brief Description  RHO guanyl-nucleotide exchange factor 14
TAIR Computational Description  RHO guanyl-nucleotide exchange factor 14;(source:Araport11)
TAIR Curator Summary  Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily.
TAIR Short Description  RHO guanyl-nucleotide exchange factor 14
TAIR Aliases  ATROPGEF14, ROPGEF14

0 Gene Rifs

1 Organism

8 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 4541  
Location: Chr1:11326251-11330791 reverse strand

Gene models - ROPGEF14 AT1G31650

? Gene models

Transcripts: 2  Exons: 14  Introns: 12 

Overlapping Features

? Genome features that overlap coordinates of this Gene

12 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
ROGFE_ARATH function Guanine-nucleotide exchange factor (GEF) that acts as an activator of Rop (Rho of plants) GTPases by promoting the exchange of GDP for GTP.
ROGFE_ARATH subcellular location Localizes to the apical region of the pollen tube plasma membrane.
ROGFE_ARATH tissue specificity Expressed in pollen grains.

2 Proteins

Function

Gene Ontology

cellular component
plasma membrane  ? ECO  
molecular function
guanyl-nucleotide exchange factor activity  ? ECO  
biological process
regulation of pollen tube growth  ? ECO  

Interactions

Interaction Network

Show the following interaction types:
Reset view
Show in table format
Export graph

Click on a gene to get more info about it.

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

8 Data Sets