Lists
This Gene is in one list:
External Links
Genomics
Overlapping Features
Genome features that overlap coordinates of this Gene
CDSs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G30330:CDS:15 | 217 | Chr1: 10686125-10686341 | Arabidopsis thaliana |
AT1G30330:CDS:14 | 191 | Chr1: 10686427-10686617 | Arabidopsis thaliana |
AT1G30330:CDS:13 | 1238 | Chr1: 10686699-10687936 | Arabidopsis thaliana |
AT1G30330:CDS:12 | 148 | Chr1: 10688018-10688165 | Arabidopsis thaliana |
AT1G30330:CDS:11 | 76 | Chr1: 10688258-10688333 | Arabidopsis thaliana |
AT1G30330:CDS:10 | 123 | Chr1: 10688414-10688536 | Arabidopsis thaliana |
AT1G30330:CDS:9 | 165 | Chr1: 10688618-10688782 | Arabidopsis thaliana |
AT1G30330:CDS:8 | 91 | Chr1: 10688866-10688956 | Arabidopsis thaliana |
AT1G30330:CDS:7 | 85 | Chr1: 10689046-10689130 | Arabidopsis thaliana |
AT1G30330:CDS:6 | 156 | Chr1: 10689215-10689370 | Arabidopsis thaliana |
AT1G30330:CDS:5 | 57 | Chr1: 10689455-10689511 | Arabidopsis thaliana |
AT1G30330:CDS:4 | 99 | Chr1: 10689605-10689703 | Arabidopsis thaliana |
AT1G30330:CDS:2 | 119 | Chr1: 10689789-10689907 | Arabidopsis thaliana |
AT1G30330:CDS:1 | 43 | Chr1: 10689994-10690036 | Arabidopsis thaliana |
AT1G30330:CDS:15.1 | 217 | Chr1: 10686125-10686341 | Arabidopsis thaliana |
AT1G30330:CDS:14.1 | 191 | Chr1: 10686427-10686617 | Arabidopsis thaliana |
AT1G30330:CDS:13.1 | 1238 | Chr1: 10686699-10687936 | Arabidopsis thaliana |
AT1G30330:CDS:12.1 | 148 | Chr1: 10688018-10688165 | Arabidopsis thaliana |
AT1G30330:CDS:11.1 | 76 | Chr1: 10688258-10688333 | Arabidopsis thaliana |
AT1G30330:CDS:10.1 | 123 | Chr1: 10688414-10688536 | Arabidopsis thaliana |
AT1G30330:CDS:9.1 | 165 | Chr1: 10688618-10688782 | Arabidopsis thaliana |
AT1G30330:CDS:8.1 | 91 | Chr1: 10688866-10688956 | Arabidopsis thaliana |
AT1G30330:CDS:7.1 | 85 | Chr1: 10689046-10689130 | Arabidopsis thaliana |
AT1G30330:CDS:6.1 | 156 | Chr1: 10689215-10689370 | Arabidopsis thaliana |
AT1G30330:CDS:5.1 | 57 | Chr1: 10689455-10689511 | Arabidopsis thaliana |
AT1G30330:CDS:4.1 | 99 | Chr1: 10689605-10689703 | Arabidopsis thaliana |
AT1G30330:CDS:3 | 113 | Chr1: 10689789-10689901 | Arabidopsis thaliana |
AT1G30330:CDS:1.1 | 43 | Chr1: 10689994-10690036 | Arabidopsis thaliana |
AT1G30330:CDS:15.2 | 217 | Chr1: 10686125-10686341 | Arabidopsis thaliana |
AT1G30330:CDS:14.2 | 191 | Chr1: 10686427-10686617 | Arabidopsis thaliana |
Exons
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G30330:exon:4 | 225 | Chr1: 10689994-10690218 | Arabidopsis thaliana |
AT1G30330:exon:1 | 534 | Chr1: 10690305-10690838 | Arabidopsis thaliana |
AT1G30330:exon:6 | 113 | Chr1: 10689789-10689901 | Arabidopsis thaliana |
AT1G30330:exon:3 | 870 | Chr1: 10689994-10690863 | Arabidopsis thaliana |
AT1G30330:exon:18 | 520 | Chr1: 10685822-10686341 | Arabidopsis thaliana |
AT1G30330:exon:17 | 191 | Chr1: 10686427-10686617 | Arabidopsis thaliana |
AT1G30330:exon:16 | 1238 | Chr1: 10686699-10687936 | Arabidopsis thaliana |
AT1G30330:exon:15 | 148 | Chr1: 10688018-10688165 | Arabidopsis thaliana |
AT1G30330:exon:14 | 76 | Chr1: 10688258-10688333 | Arabidopsis thaliana |
AT1G30330:exon:13 | 123 | Chr1: 10688414-10688536 | Arabidopsis thaliana |
AT1G30330:exon:12 | 165 | Chr1: 10688618-10688782 | Arabidopsis thaliana |
AT1G30330:exon:11 | 91 | Chr1: 10688866-10688956 | Arabidopsis thaliana |
AT1G30330:exon:10 | 85 | Chr1: 10689046-10689130 | Arabidopsis thaliana |
AT1G30330:exon:9 | 156 | Chr1: 10689215-10689370 | Arabidopsis thaliana |
AT1G30330:exon:8 | 57 | Chr1: 10689455-10689511 | Arabidopsis thaliana |
AT1G30330:exon:7 | 99 | Chr1: 10689605-10689703 | Arabidopsis thaliana |
AT1G30330:exon:5 | 119 | Chr1: 10689789-10689907 | Arabidopsis thaliana |
AT1G30330:exon:2 | 995 | Chr1: 10689994-10690988 | Arabidopsis thaliana |
Five Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G30330:five_prime_UTR:4 | 182 | Chr1: 10690037-10690218 | Arabidopsis thaliana |
AT1G30330:five_prime_UTR:1 | 534 | Chr1: 10690305-10690838 | Arabidopsis thaliana |
AT1G30330:five_prime_UTR:3 | 827 | Chr1: 10690037-10690863 | Arabidopsis thaliana |
AT1G30330:five_prime_UTR:2 | 952 | Chr1: 10690037-10690988 | Arabidopsis thaliana |
mRNAs
DB identifier | Length | Chromosome Location |
---|---|---|
AT1G30330.2 | 3827 | Chr1: 10685822-10690838 |
AT1G30330.1 | 3932 | Chr1: 10685822-10690863 |
AT1G30330.3 | 4063 | Chr1: 10685822-10690988 |
Three Prime UTRs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G30330:three_prime_UTR:1 | 303 | Chr1: 10685822-10686124 | Arabidopsis thaliana |
uORFs
DB identifier | Length | Chromosome Location |
Organism . Name |
---|---|---|---|
AT1G30330.uORF5 | 45 | Chr1: 10690116-10690160 | Arabidopsis thaliana |
AT1G30330.uORF2 | 81 | Chr1: 10690116-10690196 | Arabidopsis thaliana |
AT1G30330.uORF1 | 111 | Chr1: 10690151-10690261 | Arabidopsis thaliana |
AT1G30330.uORF3 | 72 | Chr1: 10690261-10690332 | Arabidopsis thaliana |
AT1G30330.uORF4 | 45 | Chr1: 10690558-10690602 | Arabidopsis thaliana |
Proteins
Curated comments from UniProt
Type | Comment | Proteins |
---|---|---|
ARFF_ARATH-2 ARFF_ARATH | developmental stage | Expressed in sepals at stages 11, 12 and 13 of flower development. Highly expressed in petals at stages 9-10, decreases at stage 11 and disappears after flower stage 12. In anthers, expressed at stage 11 in the tapetum, disappears early in stage 12 when the tapetum degrades and reappears throughout the anther late in stage 12 to persist at least until stage 13. In stamen filaments, expressed at stages 12 to 13, especially near the apical end of the filament. Expressed throughout the gynoecium at early stages up to stage 12, especially strongly in ovules. Expression in gynoecium decreases late in stage 12, but persists through stage 13, especially near the apical end including the style. |
ARFF_ARATH-2 ARFF_ARATH | function | Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). Seems to act as transcriptional activator. Formation of heterodimers with Aux/IAA proteins may alter their ability to modulate early auxin response genes expression. Regulates both stamen and gynoecium maturation. Promotes jasmonic acid production. Partially redundant with ARF8. |
ARFF_ARATH-2 ARFF_ARATH | similarity | Belongs to the ARF family. |
ARFF_ARATH-2 ARFF_ARATH | tissue specificity | Expressed in the whole plant. |