help  | faq  | software  | BAR
Hide

Oops!

https://bar.utoronto.ca/thalemine/service/ is incorrect
Hide

Oops!

Error: 403

Gene : AT1G15480 A. thaliana

DB identifier  ? AT1G15480 Secondary Identifier  ? locus:2037823
Brief Description  Tetratricopeptide repeat (TPR)-like superfamily protein
TAIR Computational Description  Tetratricopeptide repeat (TPR)-like superfamily protein;(source:Araport11)
TAIR Curator Summary  PPR motif containing protein. Found in mitochondria. Mutants flower early and have reduced levels of the ABI5, a regulator of FLC expression.
TAIR Short Description  Tetratricopeptide repeat (TPR)-like superfamily protein
TAIR Aliases  POCO1

0 Gene Rifs

1 Organism

6 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2658  
Location: Chr1:5317973-5320630

Gene models - AT1G15480 AT1G15480

? Gene models

Transcripts: 1  Exons: 4  Introns: 3 

Overlapping Features

? Genome features that overlap coordinates of this Gene

5 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
PPR44_ARATH similarity Belongs to the PPR family. P subfamily.

1 Proteins

Function

Gene Ontology

cellular component
mitochondrion  ? ECO  
molecular function
mRNA binding  ? ECO  
biological process
mitochondrial mRNA modification  ? ECO  

Interactions

Interaction Network

Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

6 Data Sets