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Gene : D27 A. thaliana

DB identifier  ? AT1G03055 Secondary Identifier  ? locus:505006097
Name  ? DWARF27 Brief Description  beta-carotene isomerase D27-like protein
TAIR Computational Description  beta-carotene isomerase D27-like protein;(source:Araport11)
TAIR Curator Summary  Encodes the ortholog of rice D27. It is plastid-localized and is required for the inhibition of secondary bud outgrowth and operates on a nonmobile precursor upstream of MAX1 in the SL biosynthesis pathway.
TAIR Short Description  NULL
TAIR Aliases  AtD27, D27

2 Gene Rifs

1 Organism

9 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 1840  
Location: Chr1:710018-711857 reverse strand

Gene models - D27 AT1G03055

? Gene models

Transcripts: 2  Exons: 13  Introns: 11 

Overlapping Features

? Genome features that overlap coordinates of this Gene

11 Child Features

0 Cross References

0 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
D27_ARATH function Involved in strigolactones biosynthesis by catalyzing the isomerization of the C9-C10 double bond in all-trans-beta-carotene leading to 9-cis-beta-carotene and providing the substrate for CCD7. Strigolactones are hormones that inhibit tillering and shoot branching through the MAX-dependent pathway, contribute to the regulation of shoot architectural response to phosphate-limiting conditions and function as rhizosphere signal that stimulates hyphal branching of arbuscular mycorrhizal fungi and trigger seed germination of root parasitic weeds.
D27_ARATH tissue specificity Expressed in hypocotyls and shoots. Expressed at low levels in roots.

2 Proteins

Function

Gene Ontology

cellular component
plastid  ? ECO  
chloroplast  ? ECO  
molecular function
beta-carotene isomerase activity  ? ECO  
iron ion binding  ? ECO  
biological process
strigolactone biosynthetic process  ? ECO  
secondary shoot formation  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

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Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

7 Data Sets