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Gene : KCS1 A. thaliana

DB identifier  ? AT1G01120 Secondary Identifier  ? locus:2200955
Name  ? 3-ketoacyl-CoA synthase 1 Brief Description  3-ketoacyl-CoA synthase 1
TAIR Computational Description  3-ketoacyl-CoA synthase 1;(source:Araport11)
TAIR Curator Summary  Encodes a condensing enzyme KCS1 (3-ketoacyl-CoA synthase 1) which is involved in the critical fatty acid elongation process in wax biosynthesis.
TAIR Short Description  3-ketoacyl-CoA synthase 1
TAIR Aliases  KCS1

1 Gene Rifs

1 Organism

20 Publications

0 Synonyms

Genomics

Genome feature

Region: gene ? Length: 2052  
Location: Chr1:57164-59215 reverse strand

Gene models - KCS1 AT1G01120

? Gene models

Transcripts: 1  Exons: 1 

Overlapping Features

? Genome features that overlap coordinates of this Gene

2 Child Features

1 Cross References

1 Downstream Intergenic Region

0 Located Features

1 Upstream Intergenic Region

Proteins

Curated comments from UniProt

Type Comment Proteins
KCS1_ARATH function Contributes to cuticular wax and suberin biosynthesis. Involved in both decarbonylation and acyl-reduction wax synthesis pathways. Elongase condensing enzyme mostly active with saturated fatty acids, especially with 16:0, 16:1, 18:0, and 20:0. Mediates the synthesis of VLCFAs from 20 to 26 carbons in length (e.g. C20:1, C20, C22, C24 and C26).
KCS1_ARATH pathway Lipid metabolism; fatty acid biosynthesis.
KCS1_ARATH similarity Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
KCS1_ARATH tissue specificity Ubiquitous (PubMed:10074711). Expressed in siliques, flowers, leaves and stems. Barely detected in roots (PubMed:18465198).

1 Proteins

Function

Gene Ontology

cellular component
endoplasmic reticulum  ? ECO  
endoplasmic reticulum membrane  ? ECO  
cytosolic ribosome  ? ECO  
membrane  ? ECO  
molecular function
fatty acid elongase activity  ? ECO  
biological process
cellular response to cold  ? ECO  
wax biosynthetic process  ? ECO  
response to cold  ? ECO  
response to light stimulus  ? ECO  
very long-chain fatty acid biosynthetic process  ? ECO  

Interactions

Interaction Network

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Expression

eFP Visualization

Data Source: BAR




Co-expression

Querying ATTED Service...
Data Source: ATTED-II
Top N
LS: LS is a monotonic transformation (negative logit) of MR index. Larger LS indicates stronger co-expression.

 

Homology

Phytozome Homologs

Data Source: Phytozome


0 Homologues

 

Other

9 Data Sets