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Gene : AT5G06395 A. thaliana

DB identifier

AT5G06395

Brief Description

Natural antisense transcript overlaps with AT5G42820

TAIR Computational Description	Natural antisense transcript overlaps with AT5G42820;(source:Araport11)
TAIR Short Description	NULL

0 Gene Rifs

1 Organism

Trail: Gene

0 Publications

0 Synonyms

Genomics

Genome feature

Region:	gene	Length:	884
Location:	Chr5:17170305-17171188

Genes

DB identifier	Secondary Identifier	Symbol	Name	Length	Chromosome Location	Organism . Short Name	TAIR Computational Description	TAIR Curator Summary	TAIR Short Description	TAIR Aliases
AT5G42820	locus:2165447	U2AF35B		3505	Chr5: 17169283-17172787	A. thaliana	Zinc finger C-x8-C-x5-C-x3-H type family protein;(source:Araport11)	U2 auxiliary factor small subunit. The atU2AF35b protein and its homolog, atU2AF35a, contain most of the conserved domains of hsU2AF35, including the psiRRM, one RS domain, two zinc fingers, and the two regions for interacting with U2AF large subunit. Both proteins lack the stretch of glycines present in human U2AF35. The sequences are overall 83% identical, and each Arabidopsis homolog shows approximately 70% similarity to hsU2AF35. U2AF(35) homologs were also identified from maize, rice and other plants with large-scale EST projects. Both genes are expressed in all major tissues, with atU2AF(35)a expressed at a higher level than atU2AF(35)b in most tissues. The expression patterns were different in roots: atU2AF(35)b expressed strongly in whole young roots and root tips and atU2AF(35)a limited to root vascular regions.	Zinc finger C-x8-C-x5-C-x3-H type family protein	AtC3H60, ATU2AF35B, U2AF35B

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2 Child Features

Trail: Gene

0 Cross References

0 Downstream Intergenic Region

0 Located Features

0 Upstream Intergenic Region

Proteins

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Function

Gene Ontology

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Expression

Data Source:

BAR Webservices

Querying ATTED Service... Data Source: ATTED-II

Homology

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2 Data Sets

Trail: Gene

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