help  | faq  | software  | BAR

Search our database by keyword

Examples

  • Search this entire website. Enter identifiers, names or keywords for genes, pathways, authors, ontology terms, etc. (e.g. eve, embryo, zen, allele)
  • Use OR to search for either of two terms (e.g. fly OR drosophila) or quotation marks to search for phrases (e.g. "dna binding").
  • Boolean search syntax is supported: e.g. dros* for partial matches or fly AND NOT embryo to exclude a term

Search results 1 to 100 out of 2746 for Pattern triggered immunity

<< First    < Previous  |  Next >    Last >>
0.046s

Categories

Hits by Category

Hits by Organism

Type Details Score
Ontology Term Synonym
Name: effector triggered immunity
Type: synonym
Gene
Length: 889  
Chromosome Location: Chr5: 15883179-15884067
Organism . Short Name: A. thaliana
TAIR Computational Description: Calcium-binding EF-hand family protein;(source:Araport11)
TAIR Curator Summary: Calmodulin like protein involved in negative regulation of pattern triggered immunity.
TAIR Short Description: Calcium-binding EF-hand family protein
TAIR Aliases: CML46
Gene
Length: 5334  
Chromosome Location: Chr5: 9189425-9194758
Organism . Short Name: A. thaliana
TAIR Computational Description: chloride channel D;(source:Araport11)
TAIR Curator Summary: Anion channel protein family member. Involved in negative regulation of pattern triggered immunity.
TAIR Short Description: chloride channel D
TAIR Aliases: ATCLC-D, AtCLCd, CLC-D, CLCd
Gene
Length: 7087  
Chromosome Location: Chr5: 6146725-6153811
Organism . Short Name: A. thaliana
TAIR Computational Description: protein serine/threonine kinase;(source:Araport11)
TAIR Curator Summary: Encodes a BEACH domain containing protein that is involved in targeting storage proteins to the protein storage vacuoles and effector triggered immunity to Psuedomonas syringae.
TAIR Short Description: protein serine/threonine kinases;protein tyrosine kinases;ATP binding;protein kinases
TAIR Aliases: gfs12
Publication
First Author: Igarashi D
Title: Pattern-triggered immunity suppresses programmed cell death triggered by fumonisin b1.
Year: 2013
Journal: PLoS One
Volume: 8
Pages: e60769
Gene
Length: 4639  
Chromosome Location: Chr1: 1607202-1611840
Organism . Short Name: A. thaliana
TAIR Computational Description: DNAse I-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes an inositol polyphosphate 5' phosphatase (5PTase) that is required for the proper recruitment of cells into developing vascular tissue in leaves and cotyledons. It is most similar to Type I 5PTases that are known to cleave a phosphate from IP3 or IP4. cvp2 mutants have elevated levels of IP3 and are hypersensitive to ABA in seed germination assays.
TAIR Short Description: DNAse I-like superfamily protein
TAIR Aliases: CVP2
GO Term
Description: The series of molecular signals initiated by a ligand binding of a pattern recognition receptor (PRR) to activate a plant innate immune response. PAMP-triggered immunity PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.
GeneRIF (Gene Reference into Function)
Annotation: AtCLCd negatively regulates pathogen-associated molecular pattern (PAMP)-triggered immunity (PTI).
Organism: A. thaliana
Gene: CLC-D
PubMed Id: 24449384
Gene  
Length: 2598  
Chromosome Location: Chr5: 18855955-18858552
Organism . Short Name: A. thaliana
TAIR Computational Description: protein VARIATION IN COMPOUND TRIGGERED ROOT growth protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: NULL
Publication
First Author: Sun A
Title: Nitric oxide-mediated maintenance of redox homeostasis contributes to NPR1-dependent plant innate immunity triggered by lipopolysaccharides.
Year: 2012
Journal: Plant Physiol
Volume: 160
Pages: 1081-96
Protein Domain
GeneRIF (Gene Reference into Function)
Annotation: SOBER1 is required for the suppression of bacterial effector HopZ5-triggered immunity in Arabidopsis.SOBER1 suppresses immunity triggered by multiple bacterial acetyltransferases.
Organism: A. thaliana
Gene: SOBER1
PubMed Id: 29577317
Gene
Length: 1662  
Chromosome Location: Chr5: 242450-244111
Organism . Short Name: A. thaliana
TAIR Computational Description: Tautomerase/MIF superfamily protein;(source:Araport11)
TAIR Curator Summary: Chemokine-like MDL protein; modulate flowering time and innate immunity in plants.
TAIR Short Description: Tautomerase/MIF superfamily protein
TAIR Aliases: MDL2
Gene
Length: 2294  
Chromosome Location: Chr3: 10667135-10669428
Organism . Short Name: A. thaliana
TAIR Computational Description: Leucine-rich repeat protein kinase family protein;(source:Araport11)
TAIR Curator Summary: Negative regulator of pattern-triggered immunity in complex with BIR3 and PLDγ1.
TAIR Short Description: Leucine-rich repeat protein kinase family protein
TAIR Aliases: BIR2
Gene
Length: 1328  
Chromosome Location: Chr3: 19163995-19165322
Organism . Short Name: A. thaliana
TAIR Computational Description: Tautomerase/MIF superfamily protein;(source:Araport11)
TAIR Curator Summary: Chemokine-like MDL protein; modulate flowering time and innate immunity in plants.
TAIR Short Description: Tautomerase/MIF superfamily protein
TAIR Aliases: MDL3
Publication
First Author: Choi S
Title: Arabidopsis thaliana SOBER1 (SUPPRESSOR OF AVRBST-ELICITED RESISTANCE 1) suppresses plant immunity triggered by multiple bacterial acetyltransferase effectors.
Year: 2018
Journal: New Phytol
Volume: 219
Pages: 324-335
Gene
Length: 3760  
Chromosome Location: Chr4: 16112624-16116383
Organism . Short Name: A. thaliana
TAIR Computational Description: Protein phosphatase 2C family protein;(source:Araport11)
TAIR Curator Summary: Protein phosphatase 2C family protein. Loss of function enhances immunity to bacterial pathogens.
TAIR Short Description: Protein phosphatase 2C family protein
TAIR Aliases: PP2C62
Gene
Length: 2034  
Chromosome Location: Chr1: 21884018-21886051
Organism . Short Name: A. thaliana
TAIR Computational Description: mitogen-activated protein kinase homolog 2;(source:Araport11)
TAIR Curator Summary: encodes a mitogen-activated kinase involved in innate immunity The mRNA is cell-to-cell mobile.
TAIR Short Description: mitogen-activated protein kinase homolog 2
TAIR Aliases: ATMPK2, MPK2
Gene
Length: 1739  
Chromosome Location: Chr5: 17951442-17953180
Organism . Short Name: A. thaliana
TAIR Computational Description: transmembrane protein;(source:Araport11)
TAIR Curator Summary: SCOOP (SERINE RICH ENDOGENOUS PEPTIDE) family member, involved in immunity against herbivorous insects.
TAIR Short Description: NULL
TAIR Aliases: PROSCOOP1
Gene
Length: 1273  
Chromosome Location: Chr5: 17953282-17954554
Organism . Short Name: A. thaliana
TAIR Computational Description: hypothetical protein;(source:Araport11)
TAIR Curator Summary: SCOOP (SERINE RICH ENDOGENOUS PEPTIDE) family member, involved in immunity against herbivorous insects.
TAIR Short Description: NULL
TAIR Aliases: PROSCOOP2
Gene
Length: 2251  
Chromosome Location: Chr5: 17968092-17970342
Organism . Short Name: A. thaliana
TAIR Computational Description: transmembrane protein;(source:Araport11)
TAIR Curator Summary: SCOOP (SERINE RICH ENDOGENOUS PEPTIDE) family member, involved in immunity against herbivorous insects.
TAIR Short Description: NULL
TAIR Aliases: PROSCOOP6
Gene
Length: 1247  
Chromosome Location: Chr5: 17970210-17971456
Organism . Short Name: A. thaliana
TAIR Computational Description: transmembrane protein;(source:Araport11)
TAIR Curator Summary: SCOOP (SERINE RICH ENDOGENOUS PEPTIDE) family member, involved in immunity against herbivorous insects.
TAIR Short Description: NULL
TAIR Aliases: PROSCOOP7
Gene
Length: 1346  
Chromosome Location: Chr5: 17973775-17975120
Organism . Short Name: A. thaliana
TAIR Computational Description: hypothetical protein;(source:Araport11)
TAIR Curator Summary: SCOOP (SERINE RICH ENDOGENOUS PEPTIDE) family member, involved in immunity against herbivorous insects.
TAIR Short Description: NULL
TAIR Aliases: PROSCOOP8
Protein Domain
GO Term
Description: A plant complex involved in basal disease resistance and resistance (R) gene-mediated effector triggered immunity (ETI). Regulates accumulation of the hormone salicylic acid (SA) which is a necessary component of systemic immunity. Involved in responds to bacteria, viruses and oomycetes.
GeneRIF (Gene Reference into Function)
Annotation: RAR1 molecularly links pathogen-associated molecular pattern (PAMP)-triggered immunity, effector virulence, and effector-triggered immunity
Organism: A. thaliana
Gene: PBS2
PubMed Id: 17148606
Gene
Length: 1702  
Chromosome Location: Chr3: 8309209-8310910
Organism . Short Name: A. thaliana
TAIR Computational Description: myb domain protein 15;(source:Araport11)
TAIR Curator Summary: Member of the R2R3 factor gene family. Key regulator of lignin biosynthesis in effector-triggered immunity
TAIR Short Description: myb domain protein 15
TAIR Aliases: ATMYB15, ATY19, MYB15
Gene
Length: 2303  
Chromosome Location: Chr5: 8854507-8856809
Organism . Short Name: A. thaliana
TAIR Computational Description: Protein kinase superfamily protein;(source:Araport11)
TAIR Curator Summary: Receptor like kinase involved in HopZ1a effector triggered immunity. Interacts with ZAR1. Localization to membrane is dependent on N-terminal myristoylation domain.
TAIR Short Description: Protein kinase superfamily protein
TAIR Aliases: SZE1
Gene
Length: 3419  
Chromosome Location: Chr4: 10485116-10488534
Organism . Short Name: A. thaliana
TAIR Computational Description: GDA1/CD39 nucleoside phosphatase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a putative apyrase involved in pollen exine pattern formation and anther dehiscence.
TAIR Short Description: GDA1/CD39 nucleoside phosphatase family protein
TAIR Aliases: APY7, AtAPY7
Gene
Length: 3296  
Chromosome Location: Chr2: 864997-868292
Organism . Short Name: A. thaliana
TAIR Computational Description: GDA1/CD39 nucleoside phosphatase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a putative apyrase involved in pollen exine pattern formation and anther dehiscence.
TAIR Short Description: GDA1/CD39 nucleoside phosphatase family protein
TAIR Aliases: APY6, AtAPY6
Gene
Length: 2274  
Chromosome Location: Chr3: 22052121-22054394
Organism . Short Name: A. thaliana
TAIR Computational Description: lectin-receptor kinase;(source:Araport11)
TAIR Curator Summary: Member of Receptor kinase-like protein family. Represses stomatal immunity induced by Pseudomonas syringae pv. tomato DC3000.
TAIR Short Description: lectin-receptor kinase
TAIR Aliases: ATHLECRK, HLECRK, LecRK-V.5, LECRK1
Gene
Length: 5233  
Chromosome Location: Chr3: 2782698-2787930
Organism . Short Name: A. thaliana
TAIR Computational Description: defective in exine formation protein (DEX1);(source:Araport11)
TAIR Curator Summary: Encodes DEX1 (defective in exine formation). Required for exine pattern formation during pollen development.
TAIR Short Description: defective in exine formation protein (DEX1)
TAIR Aliases: DEX1
Gene
Length: 3423  
Chromosome Location: Chr5: 18615175-18618597
Organism . Short Name: A. thaliana
TAIR Computational Description: ThiF family protein;(source:Araport11)
TAIR Curator Summary: Component of autophagy conjugation pathway. Required for proper senescence. Contributes to plant basal immunity towards fungal infection.
TAIR Short Description: ThiF family protein
TAIR Aliases: APG7, ATAPG7, ATATG7, ATG7, PEUP4
Publication
First Author: Guo W
Title: The chloride channel family gene CLCd negatively regulates pathogen-associated molecular pattern (PAMP)-triggered immunity in Arabidopsis.
Year: 2014
Journal: J Exp Bot
Volume: 65
Pages: 1205-15
Gene
Length: 4581  
Chromosome Location: Chr4: 7196991-7201571
Organism . Short Name: A. thaliana
TAIR Computational Description: Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)
TAIR Curator Summary: Leucine-rich repeat domain (NLR) receptor. Dominant negative alleles suppress catma3 autoimmunity. Co-regulates with WRKY19 basal levels of immunity to root-knot nematodes.
TAIR Short Description: Disease resistance protein (TIR-NBS-LRR class) family
TAIR Aliases: DSC1
Publication
First Author: Tintor N
Title: Layered pattern receptor signaling via ethylene and endogenous elicitor peptides during Arabidopsis immunity to bacterial infection.
Year: 2013
Journal: Proc Natl Acad Sci U S A
Volume: 110
Pages: 6211-6
Gene
Length: 1241  
Chromosome Location: Chr1: 26161551-26162791
Organism . Short Name: A. thaliana
TAIR Computational Description: Natural antisense transcript overlaps with AT1G69570;(source:Araport11)
TAIR Curator Summary: Circadian regulated lncRNA, natural antisense gene of CDF5 (AT1G69570). Displays antiphasic expression pattern in relation to CDF5 expression (PMID:28758689).
TAIR Short Description: other RNA
TAIR Aliases: FLORE
Gene
Length: 1810  
Chromosome Location: Chr5: 17753959-17755768
Organism . Short Name: A. thaliana
TAIR Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a member of the NAP subfamily of ABC transporters whose expression pattern is regulated by light and sucrose.
TAIR Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR Aliases: ABCI21, ATNAP2, ATPOP1, POP1
Gene
Length: 3506  
Chromosome Location: Chr5: 23314672-23318177
Organism . Short Name: A. thaliana
TAIR Computational Description: Calmodulin-binding protein;(source:Araport11)
TAIR Curator Summary: Required for the expression of a guardee/decoy or a negative regulator of immunity mediated by receptors carrying an N-terminal Toll-interleukin-1 receptor-like domain.
TAIR Short Description: Calmodulin-binding protein
TAIR Aliases: CBP60b
Gene
Length: 2614  
Chromosome Location: Chr3: 3016490-3019103
Organism . Short Name: A. thaliana
TAIR Computational Description: Protein kinase superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a member of subfamily VIIa of the receptor-like cytoplasmic kinases (RLCKs). It contributes to pattern-triggered immunity in response to P. syringae.
TAIR Short Description: Protein kinase superfamily protein
TAIR Aliases: PBL39, PCRK1
GO Term
Description: Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.
Gene
Length: 1895  
Chromosome Location: Chr4: 14881689-14883583
Organism . Short Name: A. thaliana
TAIR Computational Description: UDP-D-glucuronate 4-epimerase 1;(source:Araport11)
TAIR Curator Summary: Encodes a UDP-D-glucuronate 4-epimerase involved in pectin biosynthesis in the cell wall and affects cell wall integrity and immunity to fungi and bacteria.
TAIR Short Description: UDP-D-glucuronate 4-epimerase 1
TAIR Aliases: GAE1
Gene
Length: 1258  
Chromosome Location: Chr5: 17961019-17962276
Organism . Short Name: A. thaliana
TAIR Computational Description: transmembrane protein;(source:Araport11)
TAIR Curator Summary: Secreted peptide which functions in plant growth and pathogen defense. SCOOP (SERINE RICH ENDOGENOUS PEPTIDE) family member, involved in immunity against herbivorous insects.
TAIR Short Description: NULL
TAIR Aliases: PROSCOOP4, STMP10
GO Term
Description: Any process that modulates the frequency, rate or extent of innate immunity memory response.
Protein Domain
Gene
Length: 2097  
Chromosome Location: Chr2: 14629986-14632082
Organism . Short Name: A. thaliana
TAIR Computational Description: Glycolipid transfer protein (GLTP) family protein;(source:Araport11)
TAIR Curator Summary: Gene product transports the glycolipid precursor sphingosine between membranes in vitro. Mutant constitutively expresses defense-related genes that accompany the hypersensitive response normally triggered by avirulent pathogens. The mRNA is cell-to-cell mobile.
TAIR Short Description: Glycolipid transfer protein (GLTP) family protein
TAIR Aliases: ACD11
Protein
Organism . Name: Arabidopsis thaliana
Length: 406  
Protein
Organism . Name: Arabidopsis thaliana
Length: 417  
Protein
Organism . Name: Arabidopsis thaliana
Length: 1168  
Gene
Length: 1618  
Chromosome Location: Chr1: 9205800-9207417
Organism . Short Name: A. thaliana
TAIR Computational Description: Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein;(source:Araport11)
TAIR Curator Summary: Eukaryotic translation initiation factor 5A-2. Involved in programmed cell death triggered as a response to pseudomonas syringae infection. Loss of function mutants are more resistant to infection. The mRNA is cell-to-cell mobile.
TAIR Short Description: Eukaryotic translation initiation factor 5A-1 (eIF-5A 1) protein
TAIR Aliases: ATELF5A-2, ELF5A-2, FBR12
Gene
Length: 3965  
Chromosome Location: Chr1: 27484240-27488204
Organism . Short Name: A. thaliana
TAIR Computational Description: PEP1 receptor 1;(source:Araport11)
TAIR Curator Summary: Encodes a leucine-rich repeat receptor kinase. Functions as a receptor for AtPep1 to amplify innate immunity response to pathogen attacks. The mRNA is cell-to-cell mobile.
TAIR Short Description: PEP1 receptor 1
TAIR Aliases: ATPEPR1, PEPR1
Gene
Length: 2120  
Chromosome Location: Chr5: 16089678-16091797
Organism . Short Name: A. thaliana
TAIR Computational Description: Nodulin MtN3 family protein;(source:Araport11)
TAIR Curator Summary: Encodes RPG1 (RUPTURED POLLEN GRAIN1), a member of the MtN3/saliva gene family. Crucial for exine pattern formation and cell integrity of microspores.
TAIR Short Description: Nodulin MtN3 family protein
TAIR Aliases: AtSWEET8, RPG1, SWEET8
GeneRIF (Gene Reference into Function)
Annotation: DSC1 and DSC2 are responsible for autoimmunity in Arabidopsis camta3 mutants. Immunity triggered by DSC1 or DSC2 in tobacco is suppressed by CAMTA3 co-expression.[DSC1]
Organism: A. thaliana
Gene: AT4G12010
PubMed Id: 28407487
GeneRIF (Gene Reference into Function)
Annotation: DSC1 and DSC2 are responsible for autoimmunity in Arabidopsis camta3 mutants. Immunity triggered by DSC1 or DSC2 in tobacco is suppressed by CAMTA3 co-expression.[DSC2]
Organism: A. thaliana
Gene: AT5G18370
PubMed Id: 28407487
GeneRIF (Gene Reference into Function)
Annotation: FLS2 complexes regulate the expression of AtCLCd, further supporting a role for AtCLCd in pathogen-associated molecular pattern (PAMP)-triggered immunity (PTI).
Organism: A. thaliana
Gene: FLS2
PubMed Id: 24449384
Gene
Length: 1925  
Chromosome Location: Chr2: 12879663-12881587
Organism . Short Name: A. thaliana
TAIR Computational Description: Protein phosphatase 2C family protein;(source:Araport11)
TAIR Curator Summary: Encodes a chloroplast PP2C phosphatase that is required for efficient dephosphorylation of PSII proteins and involved in light acclimation.Loss of function enhances immunity to bacterial pathogens.
TAIR Short Description: Protein phosphatase 2C family protein
TAIR Aliases: AtPP2C26, PBCP
Gene
Length: 3864  
Chromosome Location: Chr5: 91838-95701
Organism . Short Name: A. thaliana
TAIR Computational Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a tRNA methyltransferase that mediates the 2'-O-ribose methylation of selected tRNA species in the anticodon loop. Mutation of this gene compromises plant immunity against bacteria.
TAIR Short Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
TAIR Aliases: AtTRM7a, SCS9, TRM7a
Gene
Length: 1775  
Chromosome Location: Chr5: 3638191-3639965
Organism . Short Name: A. thaliana
TAIR Computational Description: Protein kinase superfamily protein;(source:Araport11)
TAIR Curator Summary: Similar to receptor like kinase but does not appear to have kinase activity (psuedokinase). It is involved in HopZ1a effector triggered immunity. Interacts with ZAR1 and ZED1.Localization to membrane is dependent on N-terminal myristoylation domain
TAIR Short Description: Protein kinase superfamily protein
TAIR Aliases: BKN2, SZE2
Gene
Length: 2285  
Chromosome Location: Chr5: 18950843-18953127
Organism . Short Name: A. thaliana
TAIR Computational Description: Tetraspanin family protein;(source:Araport11)
TAIR Curator Summary: Encodes a transmembrane protein of the tetraspanin (TET) family, one of 17 members found in Arabidopsis. Double mutant analysis showed that TRN1 and TRN2 act in the same pathway. Required for the maintenance of both the radial pattern of tissue differentiation in the root and for the subsequent circumferential pattern within the epidermis.
TAIR Short Description: Tetraspanin family protein
TAIR Aliases: TET1, TRN2
Gene
Length: 3012  
Chromosome Location: Chr4: 10304662-10307673
Organism . Short Name: A. thaliana
TAIR Computational Description: Pentatricopeptide repeat (PPR) superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a pentatricopeptide (PPR) protein involved in leaf and root development. dot4 mutants have an aberrant midgap venation pattern in juvenile leaves and cotyledons.
TAIR Short Description: Pentatricopeptide repeat (PPR) superfamily protein
TAIR Aliases: DOT4
Gene
Length: 11102  
Chromosome Location: Chr1: 20637333-20648434
Organism . Short Name: A. thaliana
TAIR Computational Description: RNA polymerase II transcription mediator;(source:Araport11)
TAIR Curator Summary: Encodes the Arabidopsis homolog of the transcriptional regulator MED13, is dynamically expressed during embryogenesis and regulates both developmental timing and the radial pattern formation.
TAIR Short Description: RNA polymerase II transcription mediators
TAIR Aliases: GCT, MAB2, MED13
GO Term
Description: Any process that activates or increases the frequency, rate or extent of innate immunity memory response.
GO Term
Description: The regionalization process in which the areas along the dorsal/ventral axis are established that will lead to differences in cell differentiation. The dorsal/ventral axis is defined by a line that runs orthogonal to both the anterior/posterior and left/right axes. The dorsal end is defined by the upper or back side of an organism. The ventral end is defined by the lower or front side of an organism.
Gene
Length: 2599  
Chromosome Location: Chr3: 8603212-8605810
Organism . Short Name: A. thaliana
TAIR Computational Description: UDP-D-glucuronate 4-epimerase 6;(source:Araport11)
TAIR Curator Summary: Encodes a UDP-D-glucuronate 4-epimerase involved in pectin biosynthesis in the cell wall and affects cell wall integrity and immunity to fungi and bacteria. The mRNA is cell-to-cell mobile.
TAIR Short Description: UDP-D-glucuronate 4-epimerase 6
TAIR Aliases: GAE6
Gene
Length: 1698  
Chromosome Location: Chr5: 5509625-5511322
Organism . Short Name: A. thaliana
TAIR Computational Description: Inositol 1,3,4-trisphosphate 5/6-kinase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a inositol 1,3,4-trisphosphate 5/6-kinase. Catalyzes the phosphorylation of phytic acid (InsP6) to the symmetric InsP7 isomer 5-InsP7. Together with IPK1 modulate crosstalks between SA-dependent immunity and phosphate-starvation responses.
TAIR Short Description: Inositol 1,3,4-trisphosphate 5/6-kinase family protein
TAIR Aliases: AtITPK1, ITPK1
Ontology Term Synonym
Name: apoptosis triggered by ER stress
Type: synonym
Gene
Length: 4946  
Chromosome Location: Chr1: 26288228-26293173
Organism . Short Name: A. thaliana
TAIR Computational Description: alpha-amylase-like 3;(source:Araport11)
TAIR Curator Summary: Encodes a plastid-localized α-amylase. Expression is reduced in the SEX4 mutant. Loss of function mutations show normal diurnal pattern of starch accumulation/degradation. Expression follows circadian rhythms.
TAIR Short Description: alpha-amylase-like 3
TAIR Aliases: AMY3, ATAMY3
GO Term
Description: Any process that stops, prevents or reduces the frequency, rate or extent of innate immunity memory response.
Gene
Length: 2230  
Chromosome Location: Chr2: 10684118-10686347
Organism . Short Name: A. thaliana
TAIR Computational Description: stromal cell-derived factor 2-like protein precursor;(source:Araport11)
TAIR Curator Summary: Encodes an endoplasmic reticulum protein SDF2 (stromal-derived factor-2). Forms a complex SDF2-ERdj3B-BiP that is required for the proper accumulation of the surface-exposed leucine-rich repeat receptor kinases EFR. EFR is involved in PAMP (pathogen associated molecular patterns) triggered immunity.
TAIR Short Description: stromal cell-derived factor 2-like protein precursor
TAIR Aliases: AtSDF2, ATSDL, SDF2
GeneRIF (Gene Reference into Function)
Annotation: SERK3/BAK1 appears to integrate diverse perception events into downstream pathogen-associated molecular pattern responses, leading to immunity against a range of invading microbes.
Organism: A. thaliana
Gene: BAK1
PubMed Id: 17626179
Gene
Length: 631  
Chromosome Location: Chr2: 9903215-9903845
Organism . Short Name: A. thaliana
TAIR Computational Description: transmembrane protein;(source:Araport11)
TAIR Curator Summary: Encoding a precursor protein of a secreted peptide that is responsive to flg22 stimulus. Finetuning role in modulation of immunity through the regulation of SA and JA biosynthesis and signalling pathways.
TAIR Short Description: NULL
TAIR Aliases: PIP3, prePIP3
Gene
Length: 2075  
Chromosome Location: Chr2: 14226668-14228742
Organism . Short Name: A. thaliana
TAIR Computational Description: NAD(P)-binding Rossmann-fold superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a protein with homology to members of the dihydroflavonol-4-reductase (DFR) superfamily. Its expression pattern suggests that AtCRL2 is involved in the synthesis and/or maintenance of vascular tissue.
TAIR Short Description: NAD(P)-binding Rossmann-fold superfamily protein
TAIR Aliases: AtCRL2, CRL2
GO Term
Description: Any developmental process that results in the creation of defined areas or spaces within the mesonephros to which cells respond and eventually are instructed to differentiate.
Gene
Length: 1326  
Chromosome Location: Chr3: 21393963-21395288
Organism . Short Name: A. thaliana
TAIR Computational Description: Protein kinase superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a pseudokinase that likely acts as a decoy to lure the P. syringae effector acetyltransferase HopZ1a to the ZAR1-resistance complex, resulting in effector-triggered immunity (ETI) activation. It is acetylated by HopZ1a.
TAIR Short Description: Protein kinase superfamily protein
TAIR Aliases: ZED1
GO Term
Description: Any process involved in the carrying out of an immune response by a T cell.
Gene
Length: 2894  
Chromosome Location: Chr5: 17772856-17775749
Organism . Short Name: A. thaliana
TAIR Computational Description: C2H2-like zinc finger protein;(source:Araport11)
TAIR Curator Summary: NUC is a member of the BIRD group of transcriptional regulators and is required for the formative divisions that pattern the root. the ground tissue into cortex and endodermis.
TAIR Short Description: C2H2-like zinc finger protein
TAIR Aliases: AtIDD8, IDD8, NUC
Gene
Length: 1957  
Chromosome Location: Chr5: 20745349-20747305
Organism . Short Name: A. thaliana
TAIR Computational Description: crumpled leaf;(source:Araport11)
TAIR Curator Summary: Encodes CRL (CRUMPLED LEAF), a protein localized in the outer envelope membrane of plastids. Mutation in this gene affects the pattern of cell division, cell differentiation and plastid division.
TAIR Short Description: crumpled leaf
TAIR Aliases: CAA33, CRL
Gene
Length: 4412  
Chromosome Location: Chr3: 5908934-5913345
Organism . Short Name: A. thaliana
TAIR Computational Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes DRM3 (Domains Rearranged Methyltransferase3), a catalytically mutated paralog of the cytosine methyltransferase DRM2. Despite being catalytically mutated, DRM3 is required for normal maintenance of non-CG DNA methylation, establishment of RNA-directed DNA methylation triggered by repeat sequences and accumulation of repeat-associated small RNAs.
TAIR Short Description: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
TAIR Aliases: AtDRM3, DRM3
Ontology Term Synonym
Name: effector-triggered immunity
Type: synonym
Ontology Term Synonym
Name: cell-mediated immunity
Type: synonym
Ontology Term Synonym
Name: innate immunity
Type: synonym
Ontology Term Synonym  
Name: Acquired immunity
Ontology Term
Description: Protein involved in adaptive immunity. Vertebrates can develop a broad and almost infinite repertoire of antigen-specific receptors, which allows vertebrates to recognize almost any potential pathogen or toxin and to mount antigen-specific responses to it. Two types of adaptive immunity systems have evolved in vertebrates in order to generate immune receptor diversity. The jawed vertebrates strategy uses the V(D)JC recombination to achieve combinatorial diversity of immunoglobulin-based B cell receptors and T cell receptors. The jawless vertebrate strategy uses the somatic rearrangements of variable leucine-rich cassettes in the variable lymphocyte receptors (VLRs). The hallmarks of an adaptive immune system is the production of antigen-specific recognition receptor by somatic gene rearrangement. The long life of some antigen-primed cytotoxic lymphocytes and plasma cells provide protective memory to prevent reinvasion
Gene
Length: 4098  
Chromosome Location: Chr1: 19987117-19991214
Organism . Short Name: A. thaliana
TAIR Computational Description: mitogen-activated protein kinase kinase kinase 3;(source:Araport11)
TAIR Curator Summary: Encodes a member of the MEKK subfamily that functions redundantly with MAPKKK5 to activate MPK3/6 downstream of multiple pattern recognition receptors and confer resistance to both bacterial and fungal pathogens.
TAIR Short Description: mitogen-activated protein kinase kinase kinase 3
TAIR Aliases: MAP3KA, MAPKKK3
Gene
Length: 3859  
Chromosome Location: Chr5: 26695568-26699426
Organism . Short Name: A. thaliana
TAIR Computational Description: mitogen-activated protein kinase kinase kinase 5;(source:Araport11)
TAIR Curator Summary: Encodes a member of the MEKK subfamily that functions redundantly with MAPKKK3 to activate MPK3/6 downstream of multiple pattern recognition receptors and confer resistance to both bacterial and fungal pathogens.
TAIR Short Description: mitogen-activated protein kinase kinase kinase 5
TAIR Aliases: MAPKKK5
Publication
First Author: Zlotnik A
Title: Chemokines: a new classification system and their role in immunity.
Year: 2000
Journal: Immunity
Volume: 12
Pages: 121-7
Publication
First Author: Garlanda C
Title: The interleukin-1 family: back to the future.
Year: 2013
Journal: Immunity
Volume: 39
Pages: 1003-18
Publication
First Author: de Saint-Vis B
Title: A novel lysosome-associated membrane glycoprotein, DC-LAMP, induced upon DC maturation, is transiently expressed in MHC class II compartment.
Year: 1998
Journal: Immunity
Volume: 9
Pages: 325-36
Publication
First Author: Jin T
Title: Structures of the HIN domain:DNA complexes reveal ligand binding and activation mechanisms of the AIM2 inflammasome and IFI16 receptor.
Year: 2012
Journal: Immunity
Volume: 36
Pages: 561-71
Publication
First Author: Maltbaek JH
Title: ABCC1 transporter exports the immunostimulatory cyclic dinucleotide cGAMP.
Year: 2022
Journal: Immunity
Volume: 55
Pages: 1799-1812.e4
Publication
First Author: Le LQ
Title: Mice lacking the orphan G protein-coupled receptor G2A develop a late-onset autoimmune syndrome.
Year: 2001
Journal: Immunity
Volume: 14
Pages: 561-71
Publication
First Author: Yoon DW
Title: Tap: a novel cellular protein that interacts with tip of herpesvirus saimiri and induces lymphocyte aggregation.
Year: 1997
Journal: Immunity
Volume: 6
Pages: 571-82
Publication
First Author: Dong G
Title: Insights into MHC class I peptide loading from the structure of the tapasin-ERp57 thiol oxidoreductase heterodimer.
Year: 2009
Journal: Immunity
Volume: 30
Pages: 21-32
Publication
First Author: Wiley SR
Title: Identification and characterization of a new member of the TNF family that induces apoptosis.
Year: 1995
Journal: Immunity
Volume: 3
Pages: 673-82
Publication
First Author: Lenz LL
Title: Identification of an H2-M3-restricted Listeria epitope: implications for antigen presentation by M3.
Year: 1996
Journal: Immunity
Volume: 5
Pages: 63-72
Publication
First Author: Oftedal BE
Title: Dominant Mutations in the Autoimmune Regulator AIRE Are Associated with Common Organ-Specific Autoimmune Diseases.
Year: 2015
Journal: Immunity
Volume: 42
Pages: 1185-96
Publication
First Author: Dorner BG
Title: Selective expression of the chemokine receptor XCR1 on cross-presenting dendritic cells determines cooperation with CD8+ T cells.
Year: 2009
Journal: Immunity
Volume: 31
Pages: 823-33
Publication
First Author: Pajerowski AG
Title: NKAP is a transcriptional repressor of notch signaling and is required for T cell development.
Year: 2009
Journal: Immunity
Volume: 30
Pages: 696-707
Publication
First Author: Kolls JK
Title: Interleukin-17 family members and inflammation.
Year: 2004
Journal: Immunity
Volume: 21
Pages: 467-76
Publication
First Author: Oppmann B
Title: Novel p19 protein engages IL-12p40 to form a cytokine, IL-23, with biological activities similar as well as distinct from IL-12.
Year: 2000
Journal: Immunity
Volume: 13
Pages: 715-25