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Search results 1 to 100 out of 6518 for Microbe-associated molecular pattern

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Type Details Score
Ontology Term Synonym
Ontology Term Synonym
Name: microbe-associated molecular pattern receptor activity
Type: synonym
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: CERK1 plays a critical role in fungal microbe-associated molecular pattern perception in plants.
Organism: A. thaliana
Gene: CERK1
PubMed Id: 18042724
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Publication
23400703
First Author: Flury P
Title: The anticipation of danger: microbe-associated molecular pattern perception enhances AtPep-triggered oxidative burst.
Year: 2013
Journal: Plant Physiol
Volume: 161
Pages: 2023-35
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Publication
23898033
First Author: Jehle AK
Title: The receptor-like protein ReMAX of Arabidopsis detects the microbe-associated molecular pattern eMax from Xanthomonas.
Year: 2013
Journal: Plant Cell
Volume: 25
Pages: 2330-40
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Ontology Term Synonym
Ontology Term Synonym
Name: pathogen-associated molecular pattern signalling
Type: synonym
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Protein Domain
IPR046956
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GO Term
GO:0038187 | pattern recognition receptor activity
Description: Combining with a pathogen-associated molecular pattern (PAMP), a structure conserved among microbial species to initiate an innate immune response.
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Publication
19400840
First Author: Aslam SN
Title: Microbe-associated molecular pattern (MAMP) signatures, synergy, size and charge: influences on perception or mobility and host defence responses.
Year: 2009
Journal: Mol Plant Pathol
Volume: 10
Pages: 375-87
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: studies show that CBP60g constitutes a Ca(2+) link between microbe-associated molecular pattern (MAMP) recognition and salicylic acid accumulation that is important for resistance to Pseudomonas syringae
Organism: A. thaliana
Gene: CBP60G
PubMed Id: 19214217
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Authors demonstrate that recognition of the flagellin peptide microbe-associated molecular pattern flg22 triggers accumulation of RIN4 phosphorylated at serine 141 (pS141) that mediates derepression of several immune outputs.
Organism: A. thaliana
Gene: RIN4
PubMed Id: 25299334
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Ontology Term Synonym
Ontology Term Synonym
Name: pathogen associated molecular pattern receptor activity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: pathogen-associated molecular pattern receptor decoy activity
Type: synonym
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: FLS2 functions beyond flagellin perception to detect other microbe-associated molecular patterns
Organism: A. thaliana
Gene: FLS2
PubMed Id: 21576467
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Ontology Term Synonym
Ontology Term Synonym
Name: suppression by symbiont of microbe-associated molecular pattern-induced host innate immune response
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: negative regulation by symbiont of microbe-associated molecular pattern-induced host innate immunity
Type: synonym
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Gene
AT1G05470 | locus:2201016 | CVP2 | COTYLEDON VASCULAR PATTERN 2
Length: 4639  
Chromosome Location: Chr1: 1607202-1611840
Organism . Short Name: A. thaliana
TAIR Computational Description: DNAse I-like superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes an inositol polyphosphate 5' phosphatase (5PTase) that is required for the proper recruitment of cells into developing vascular tissue in leaves and cotyledons. It is most similar to Type I 5PTases that are known to cleave a phosphate from IP3 or IP4. cvp2 mutants have elevated levels of IP3 and are hypersensitive to ABA in seed germination assays.
TAIR Short Description: DNAse I-like superfamily protein
TAIR Aliases: CVP2
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: BAK1 participates in the maintenance of the microbe-associated molecular patterns (MAMP)-specific response.
Organism: A. thaliana
Gene: BAK1
PubMed Id: 21668535
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GO Term
GO:0140320 | PAMP receptor decoy activity
Description: Binding and sequestering PAMP ligands in order to prevent them from binding and activating to the host PAMP receptor. Usually this activity is encoded by a symbiont or a pathogen to prevent activation of the host innate immune response.
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Protein Domain
IPR044812
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Eesults show that ReMAX/RLP1 (RECEPTOR-LIKE PROTEIN1) determines specificity for microbe-associated molecular patten eMax.
Organism: A. thaliana
Gene: RLP1
PubMed Id: 23898033
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Ontology Term Synonym
Ontology Term Synonym
Name: negative regulation by symbiont of microbe-associated molecular pattern-induced host innate immune response
Type: synonym
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Gene
AT1G70520 | locus:2026821 | CRK2 | cysteine-rich RLK (RECEPTOR-like protein kinase) 2
Length: 2900  
Chromosome Location: Chr1: 26584729-26587628
Organism . Short Name: A. thaliana
TAIR Computational Description: cysteine-rich RLK (RECEPTOR-like protein kinase) 2;(source:Araport11)
TAIR Curator Summary: Encodes a cysteine-rich receptor-like protein kinase located to the plasma membrane. Involved in regulating microbe-associated molecular pattern-triggered ROS production and stress induced callose deposition at the plasmodesmata in roots. Required for MAMP-triggered responses and resistance to Pseudomonas syringae pv. tomato 118 DC3000 .
TAIR Short Description: cysteine-rich RLK (RECEPTOR-like protein kinase) 2
TAIR Aliases: ASG6, CRK2
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Publication
22972705
First Author: Lakshmanan V
Title: Microbe-associated molecular patterns-triggered root responses mediate beneficial rhizobacterial recruitment in Arabidopsis.
Year: 2012
Journal: Plant Physiol
Volume: 160
Pages: 1642-61
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Publication
20348432
First Author: Millet YA
Title: Innate immune responses activated in Arabidopsis roots by microbe-associated molecular patterns.
Year: 2010
Journal: Plant Cell
Volume: 22
Pages: 973-90
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Publication
23593000
First Author: Henty-Ridilla JL
Title: The plant actin cytoskeleton responds to signals from microbe-associated molecular patterns.
Year: 2013
Journal: PLoS Pathog
Volume: 9
Pages: e1003290
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Gene
AT5G47960 | locus:2152753 | RABA4C | RAB GTPase homolog A4C
Length: 1194  
Chromosome Location: Chr5: 19421340-19422533
Organism . Short Name: A. thaliana
TAIR Computational Description: RAB GTPase homolog A4C;(source:Araport11)
TAIR Curator Summary: Encodes a small molecular weight g-protein.
TAIR Short Description: RAB GTPase homolog A4C
TAIR Aliases: ATRABA4C, RABA4C, SMG1
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: WRKY factors are the major regulators of microbe-associated molecular patterns-induced PROPEP2 and PROPEP3 expression.
Organism: A. thaliana
Gene: PROPEP2
PubMed Id: 23496690
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: WRKY factors are the major regulators of microbe-associated molecular patterns-induced PROPEP2 and PROPEP3 expression.
Organism: A. thaliana
Gene: PROPEP3
PubMed Id: 23496690
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Publication
22087001
First Author: Belkhadir Y
Title: Brassinosteroids modulate the efficiency of plant immune responses to microbe-associated molecular patterns.
Year: 2012
Journal: Proc Natl Acad Sci U S A
Volume: 109
Pages: 297-302
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: NSl1 protein activates programmed cell death via tryptophan metabolism in microbe-associated molecular patterns -triggered immunity.
Organism: A. thaliana
Gene: NSL1
PubMed Id: 27711985
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Gene
AT1G15757 | locus:1009023084 | AT1G15757 | -
 
Length: 338  
Chromosome Location: Chr1: 5424242-5424579
Organism . Short Name: A. thaliana
TAIR Computational Description: Molecular chaperone Hsp40/DnaJ family protein;(source:Araport11)
TAIR Curator Summary: Encodes a defensin-like (DEFL) family protein.
TAIR Short Description: Molecular chaperone Hsp40/DnaJ family protein
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Gene
AT2G20465 | locus:1005716647 | AT2G20465 | -
 
Length: 492  
Chromosome Location: Chr2: 8825053-8825544
Organism . Short Name: A. thaliana
TAIR Computational Description: Molecular chaperone Hsp40/DnaJ family protein;(source:Araport11)
TAIR Curator Summary: Encodes a defensin-like (DEFL) family protein.
TAIR Short Description: Molecular chaperone Hsp40/DnaJ family protein
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Gene
AT2G40995 | locus:1009023221 | AT2G40995 | -
 
Length: 445  
Chromosome Location: Chr2: 17109360-17109804
Organism . Short Name: A. thaliana
TAIR Computational Description: Molecular chaperone Hsp40/DnaJ family protein;(source:Araport11)
TAIR Curator Summary: Encodes a defensin-like (DEFL) family protein.
TAIR Short Description: Molecular chaperone Hsp40/DnaJ family protein
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Gene
AT4G39960 | locus:2140035 | AT4G39960 | -
Length: 2885  
Chromosome Location: Chr4: 18533734-18536618
Organism . Short Name: A. thaliana
TAIR Computational Description: Molecular chaperone Hsp40/DnaJ family protein;(source:Araport11)
TAIR Curator Summary: Essential for chloroplast iron?sulfur cluster biogenesis.
TAIR Short Description: Molecular chaperone Hsp40/DnaJ family protein
TAIR Aliases: DJA5
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Gene
AT3G17830 | locus:2088585 | AT3G17830 | -
Length: 3053  
Chromosome Location: Chr3: 6101753-6104805
Organism . Short Name: A. thaliana
TAIR Computational Description: Molecular chaperone Hsp40/DnaJ family protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Molecular chaperone Hsp40/DnaJ family protein
TAIR Aliases: DJA4
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Gene
AT1G80030 | locus:2016234 | AT1G80030 | -
Length: 4258  
Chromosome Location: Chr1: 30104830-30109087
Organism . Short Name: A. thaliana
TAIR Computational Description: Molecular chaperone Hsp40/DnaJ family protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Molecular chaperone Hsp40/DnaJ family protein
TAIR Aliases: DJA7
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Gene
AT4G08028 | locus:1009023310 | AT4G08028 | -
 
Length: 353  
Chromosome Location: Chr4: 4851530-4851882
Organism . Short Name: A. thaliana
TAIR Computational Description: Molecular chaperone Hsp40/DnaJ family protein;(source:Araport11)
TAIR Curator Summary: Encodes a defensin-like (DEFL) family protein.
TAIR Short Description: Molecular chaperone Hsp40/DnaJ family protein
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Gene
AT5G44780 | locus:2156344 | MORF4 | multiple organellar RNA editing factor 4
Length: 3004  
Chromosome Location: Chr5: 18067925-18070928
Organism . Short Name: A. thaliana
TAIR Computational Description: high molecular weight subunit-like glutenin;(source:Araport11)
TAIR Curator Summary: Member of MORF family consisting of of nine full-length proteins encoded in the nuclear genome. MORF proteins are required for all RNA editing events in plastids and for many, possibly also all, sites in mitochondria. Potential link between the RNA binding PPR protein and the protein contributing the enzymatic activity in RNA editing.
TAIR Short Description: NULL
TAIR Aliases: MORF4
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Gene
AT5G50115 | locus:504954888 | AT5G50115 | -
 
Length: 1548  
Chromosome Location: Chr5: 20379489-20381036
Organism . Short Name: A. thaliana
TAIR Computational Description: molecular chaperone Hsp40/DnaJ family protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: NULL
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Gene
AT5G50510 | locus:2159742 | AT5G50510 | -
 
Length: 690  
Chromosome Location: Chr5: 20567386-20568075
Organism . Short Name: A. thaliana
TAIR Computational Description: Molecular chaperone Hsp40/DnaJ family protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Molecular chaperone Hsp40/DnaJ family protein
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Gene
AT5G50620 | locus:2832380 | AT5G50620 | -
 
Length: 690  
Chromosome Location: Chr5: 20600727-20601416
Organism . Short Name: A. thaliana
TAIR Computational Description: Molecular chaperone Hsp40/DnaJ family protein;(source:Araport11)
TAIR Curator Summary: NULL
TAIR Short Description: Molecular chaperone Hsp40/DnaJ family protein
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Publication
25522736
First Author: Ranf S
Title: Microbe-associated molecular pattern-induced calcium signaling requires the receptor-like cytoplasmic kinases, PBL1 and BIK1.
Year: 2014
Journal: BMC Plant Biol
Volume: 14
Pages: 374
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: AtCLCd negatively regulates pathogen-associated molecular pattern (PAMP)-triggered immunity (PTI).
Organism: A. thaliana
Gene: CLC-D
PubMed Id: 24449384
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Gene
AT5G56980 | locus:2164625 | AT5G56980 | -
 
Length: 1663  
Chromosome Location: Chr5: 23056080-23057742
Organism . Short Name: A. thaliana
TAIR Computational Description: cotton fiber protein;(source:Araport11)
TAIR Curator Summary: Pathogen-associated molecular pattern-induced gene.Responsive to jasmonic acid and wounding.
TAIR Short Description: NULL
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Ontology Term Synonym
Ontology Term Synonym
Name: suppression of host pathogen-associated molecular pattern receptor signaling pathway
Type: synonym
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Binding of WRKY18, WRKY40, and WRKY33 to promoters of genes Implicated in microbe-associated molecular patterns (MAMPs)-triggered Immunity.
Organism: A. thaliana
Gene: WRKY33
PubMed Id: 28011690
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Binding of WRKY18, WRKY40, and WRKY33 to promoters of genes Implicated in microbe-associated molecular patterns (MAMPs)-triggered Immunity.
Organism: A. thaliana
Gene: WRKY18
PubMed Id: 28011690
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Binding of WRKY18, WRKY40, and WRKY33 to promoters of genes Implicated in microbe-associated molecular patterns (MAMPs)-triggered Immunity.
Organism: A. thaliana
Gene: WRKY40
PubMed Id: 28011690
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GO Term
GO:0002752 | cell surface pattern recognition receptor signaling pathway
Description: The series of molecular signals initiated by a ligand binding to a cell surface pattern recognition receptor (PRR). PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.
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Gene
AT5G60160 | locus:2143990 | AT5G60160 | -
Length: 3268  
Chromosome Location: Chr5: 24223647-24226914
Organism . Short Name: A. thaliana
TAIR Computational Description: Zn-dependent exopeptidases superfamily protein;(source:Araport11)
TAIR Curator Summary: Vacuolar aspartyl aminopeptidase which also functions as a molecular chaperone.
TAIR Short Description: Zn-dependent exopeptidases superfamily protein
TAIR Aliases: DAP1
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Gene
AT3G44485 | - | AT3G44485 | -
   
Length: 924  
Chromosome Location: Chr3: 16096477-16097400
Organism . Short Name: A. thaliana
TAIR Computational Description: Low molecular weight phosphotyrosine protein phosphatase;(source:Araport11)
TAIR Short Description: NULL
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Publication
22080602
First Author: Serrano M
Title: Repression of sucrose/ultraviolet B light-induced flavonoid accumulation in microbe-associated molecular pattern-triggered immunity in Arabidopsis.
Year: 2012
Journal: Plant Physiol
Volume: 158
Pages: 408-22
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Gene
AT5G15660 | locus:2143186 | AT5G15660 | -
 
Length: 1390  
Chromosome Location: Chr5: 5095652-5097041
Organism . Short Name: A. thaliana
TAIR Computational Description: F-box and associated interaction domains-containing protein;(source:Araport11)
TAIR Curator Summary: F-box domain protein, expressed in response to microbe-associated patterns Flg22-induced upregulation can be broken by 3AB treatment. Mutants have reduced callose deposition in response to infection.
TAIR Short Description: F-box and associated interaction domains-containing protein
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: ASR3 functions as a transcriptional repressor regulated by microbe-associated molecular patterns-activated MPK4 to fine-tune plant immune gene expression.[ASR3]
Organism: A. thaliana
Gene: AT2G33550
PubMed Id: 25770109
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: ASR3 functions as a transcriptional repressor regulated by microbe-associated molecular patterns-activated MPK4 to fine-tune plant immune gene expression.
Organism: A. thaliana
Gene: MPK4
PubMed Id: 25770109
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GO Term
GO:0002221 | pattern recognition receptor signaling pathway
Description: The series of molecular signals initiated by a ligand binding to a pattern recognition receptor (PRR), and ending with the regulation of a downstream cellular process, e.g. transcription. PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species, or damage-associated molecular pattern (DAMPs), endogenous molecules released from damaged cells.
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GO Term
GO:0002754 | endosomal pattern recognition receptor signaling pathway
Description: The series of molecular signals initiated by the binding of a ligand to an intracellular vesicle pattern recognition receptor (PRR). PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.
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Gene
AT4G15310 | locus:2129960 | CYP702A3 | cytochrome P450, family 702, subfamily A, polypeptide 3
Length: 3491  
Chromosome Location: Chr4: 8736721-8740211
Organism . Short Name: A. thaliana
TAIR Computational Description: cytochrome P450, family 702, subfamily A, polypeptide 3;(source:Araport11)
TAIR Curator Summary: a member of the cytochrome P450 gene family. molecular function unknown.
TAIR Short Description: cytochrome P450, family 702, subfamily A, polypeptide 3
TAIR Aliases: CYP702A3
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Gene
AT4G15393 | locus:504955449 | CYP702A5 | cytochrome P450, family 702, subfamily A, polypeptide 5
Length: 3163  
Chromosome Location: Chr4: 8804070-8807232
Organism . Short Name: A. thaliana
TAIR Computational Description: cytochrome P450, family 702, subfamily A, polypeptide 5;(source:Araport11)
TAIR Curator Summary: a member of the cytochrome P450 gene family. molecular function unknown.
TAIR Short Description: cytochrome P450, family 702, subfamily A, polypeptide 5
TAIR Aliases: CYP702A5
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Gene
AT1G65670 | locus:2018511 | CYP702A1 | cytochrome P450, family 702, subfamily A, polypeptide 1
Length: 2235  
Chromosome Location: Chr1: 24421835-24424069
Organism . Short Name: A. thaliana
TAIR Computational Description: cytochrome P450, family 702, subfamily A, polypeptide 1;(source:Araport11)
TAIR Curator Summary: a member of the cytochrome P450 gene family. molecular function unknown.
TAIR Short Description: cytochrome P450, family 702, subfamily A, polypeptide 1
TAIR Aliases: CYP702A1
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GO Term
GO:0140894 | endolysosomal toll-like receptor signaling pathway
Description: The series of molecular signals initiated by a ligand binding to an endolysosomal pattern recognition receptor (PRR) of the toll-like family. PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: residue E919 is indispensable for RBOHD function in the microbe-associated molecular pattern-induced reactive oxygen species burst and stomatal closure
Organism: A. thaliana
Gene: RBOHD
PubMed Id: 31379142
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Gene
AT5G39670 | locus:2164870 | AT5G39670 | -
Length: 889  
Chromosome Location: Chr5: 15883179-15884067
Organism . Short Name: A. thaliana
TAIR Computational Description: Calcium-binding EF-hand family protein;(source:Araport11)
TAIR Curator Summary: Calmodulin like protein involved in negative regulation of pattern triggered immunity.
TAIR Short Description: Calcium-binding EF-hand family protein
TAIR Aliases: CML46
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GO Term
GO:0002753 | cytosolic pattern recognition receptor signaling pathway
Description: The series of molecular signals initiated by the binding of a ligand from another organism to a cytosolic pattern recognition receptor (PRR). PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.
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Gene
AT1G49670 | locus:2012166 | NQR | -
Length: 5343  
Chromosome Location: Chr1: 18380804-18386146
Organism . Short Name: A. thaliana
TAIR Computational Description: ARP protein (REF);(source:Araport11)
TAIR Curator Summary: molecular function has not been defined. Was shown involved in oxidative stress tolerance.
TAIR Short Description: ARP protein (REF)
TAIR Aliases: NQR
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Gene
AT1G61380 | locus:2197729 | SD1-29 | S-domain-1 29
Length: 4150  
Chromosome Location: Chr1: 22645923-22650072
Organism . Short Name: A. thaliana
TAIR Computational Description: S-domain-1 29;(source:Araport11)
TAIR Curator Summary: Encodes a membrane localized S-domain receptor kinase that is involved in lipopolysaccharide (LPS) sensing. SD1-29 detected LPS of Pseudomonas and Xanthomonas species for which it serves as a microbe associated molecular pattern triggering innate immunity. Loses of function mutants are hyper susceptible to P.syringae.
TAIR Short Description: S-domain-1 29
TAIR Aliases: LORE, SD1-29
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Gene
AT4G19180 | locus:2134731 | AT4G19180 | -
Length: 3419  
Chromosome Location: Chr4: 10485116-10488534
Organism . Short Name: A. thaliana
TAIR Computational Description: GDA1/CD39 nucleoside phosphatase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a putative apyrase involved in pollen exine pattern formation and anther dehiscence.
TAIR Short Description: GDA1/CD39 nucleoside phosphatase family protein
TAIR Aliases: APY7, AtAPY7
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Gene
AT2G02970 | locus:2056725 | AT2G02970 | -
Length: 3296  
Chromosome Location: Chr2: 864997-868292
Organism . Short Name: A. thaliana
TAIR Computational Description: GDA1/CD39 nucleoside phosphatase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a putative apyrase involved in pollen exine pattern formation and anther dehiscence.
TAIR Short Description: GDA1/CD39 nucleoside phosphatase family protein
TAIR Aliases: APY6, AtAPY6
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Gene
AT5G26240 | locus:2179724 | CLC-D | chloride channel D
Length: 5334  
Chromosome Location: Chr5: 9189425-9194758
Organism . Short Name: A. thaliana
TAIR Computational Description: chloride channel D;(source:Araport11)
TAIR Curator Summary: Anion channel protein family member. Involved in negative regulation of pattern triggered immunity.
TAIR Short Description: chloride channel D
TAIR Aliases: ATCLC-D, AtCLCd, CLC-D, CLCd
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GO Term
GO:0140426 | pathogen-associated molecular pattern receptor signaling pathway
Description: The series of molecular signals initiated by a ligand binding of a pattern recognition receptor (PRR) to activate a plant innate immune response. PAMP-triggered immunity PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: RAR1 molecularly links pathogen-associated molecular pattern (PAMP)-triggered immunity, effector virulence, and effector-triggered immunity
Organism: A. thaliana
Gene: PBS2
PubMed Id: 17148606
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Gene
AT3G09090 | locus:2095274 | DEX1 | DEFECTIVE IN EXINE FORMATION 1
Length: 5233  
Chromosome Location: Chr3: 2782698-2787930
Organism . Short Name: A. thaliana
TAIR Computational Description: defective in exine formation protein (DEX1);(source:Araport11)
TAIR Curator Summary: Encodes DEX1 (defective in exine formation). Required for exine pattern formation during pollen development.
TAIR Short Description: defective in exine formation protein (DEX1)
TAIR Aliases: DEX1
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Gene
AT2G01890 | locus:2059748 | PAP8 | purple acid phosphatase 8
Length: 2583  
Chromosome Location: Chr2: 396756-399338
Organism . Short Name: A. thaliana
TAIR Computational Description: purple acid phosphatase 8;(source:Araport11)
TAIR Curator Summary: Encodes a purple acid phosphatase (PAP) belonging to the low molecular weight plant PAP group.
TAIR Short Description: purple acid phosphatase 8
TAIR Aliases: ATPAP8, PAP8
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Publication
24259685
First Author: Zhang L
Title: Fungal endopolygalacturonases are recognized as microbe-associated molecular patterns by the arabidopsis receptor-like protein RESPONSIVENESS TO BOTRYTIS POLYGALACTURONASES1.
Year: 2014
Journal: Plant Physiol
Volume: 164
Pages: 352-64
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: TGA10 is involved in reactive oxygen species mediated signaling during pathogen-associated molecular pattern responses.
Organism: A. thaliana
Gene: TGA10
PubMed Id: 27717447
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: TGA9 is involved in reactive oxygen species mediated signaling during pathogen-associated molecular pattern responses.
Organism: A. thaliana
Gene: TGA9
PubMed Id: 27717447
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Gene
AT2G27490 | locus:2038663 | ATCOAE | -
Length: 2474  
Chromosome Location: Chr2: 11748015-11750488
Organism . Short Name: A. thaliana
TAIR Computational Description: dephospho-CoA kinase family;(source:Araport11)
TAIR Curator Summary: AT2G27490 encodes dephospho-CoA kinase. The molecular function was shown to phosphorylate the ribosyl moiety forming CoA.
TAIR Short Description: dephospho-CoA kinase family
TAIR Aliases: ATCOAE
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Gene
AT1G12350 | locus:2034690 | COAB | 4-phospho-panto-thenoylcysteine synthetase
Length: 2513  
Chromosome Location: Chr1: 4198337-4200849
Organism . Short Name: A. thaliana
TAIR Computational Description: 4-phospho-panto-thenoylcysteine synthetase;(source:Araport11)
TAIR Curator Summary: At1g12350 encodes phosphopantothenoylcysteine synthetase (phosphopantothenoylcysteine ligase). Its molecular function was shown to add cysteine forming (R)-4’-phospho-N-pantothenoylcysteine (PPC)
TAIR Short Description: 4-phospho-panto-thenoylcysteine synthetase
TAIR Aliases: ATCOAB, COAB
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: role in pathogen-associated molecular pattern (PAMP)-triggered immunity, basal resistance, non-host resistance and systemic acquired resistance
Organism: A. thaliana
Gene: CRT1
PubMed Id: 23250427
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Protein
A0A1P8B0X4_ARATH | A0A1P8B0X4
Organism . Name: Arabidopsis thaliana
Length: 83  
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Protein
A0A1R7T3H8_ARATH | A0A1R7T3H8
Organism . Name: Arabidopsis thaliana
Length: 584  
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Protein
A70_ARATH | F4K956
Organism . Name: Arabidopsis thaliana
Length: 379  
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Protein
Q058J9_ARATH | Q058J9
Organism . Name: Arabidopsis thaliana
Length: 517  
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Protein
Q940V1_ARATH | Q940V1
Organism . Name: Arabidopsis thaliana
Length: 447  
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Protein
F4K7J1_ARATH | F4K7J1
Organism . Name: Arabidopsis thaliana
Length: 485  
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Protein
A0A1P8ART2_ARATH | A0A1P8ART2
Organism . Name: Arabidopsis thaliana
Length: 486  
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Gene
AT1G60440 | locus:2195638 | PANK1 | pantothenate kinase 1
Length: 2843  
Chromosome Location: Chr1: 22266416-22269258
Organism . Short Name: A. thaliana
TAIR Computational Description: pantothenate kinase 1;(source:Araport11)
TAIR Curator Summary: The gene AT1G60440 encodes pantothenate kinase 1. Its molecular function was shown to phosphorylate pantothenate to form 4’-phosphopantothenate.
TAIR Short Description: pantothenate kinase 1
TAIR Aliases: ATCOAA, ATPANK1, PANK1
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Gene
AT5G16990 | locus:2148166 | AT5G16990 | -
 
Length: 2943  
Chromosome Location: Chr5: 5581524-5584466
Organism . Short Name: A. thaliana
TAIR Computational Description: Zinc-binding dehydrogenase family protein;(source:Araport11)
TAIR Curator Summary: molecular function has not been defined, was shown involved in oxidative stress tolerance. The mRNA is cell-to-cell mobile.
TAIR Short Description: Zinc-binding dehydrogenase family protein
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Gene
AT5G05300 | locus:2153584 | AT5G05300 | -
Length: 755  
Chromosome Location: Chr5: 1569855-1570609
Organism . Short Name: A. thaliana
TAIR Computational Description: hypothetical protein;(source:Araport11)
TAIR Curator Summary: IDL6 peptide is induced in response to Pathogen-Associated Molecular Patterns (PAMPs). Overexpression of IDL6 results in increased susceptibility to pathogens.
TAIR Short Description: NULL
TAIR Aliases: IDL6
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Gene
AT5G20480 | locus:2149922 | EFR | EF-TU receptor
Length: 4393  
Chromosome Location: Chr5: 6921509-6925901
Organism . Short Name: A. thaliana
TAIR Computational Description: EF-TU receptor;(source:Araport11)
TAIR Curator Summary: Encodes a predicted leucine-rich repeat receptor kinase (LRR-RLK). Functions as the receptor for bacterial PAMP (pathogen associated molecular patterns) EF-Tu.
TAIR Short Description: EF-TU receptor
TAIR Aliases: EFR
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Gene
AT1G69572 | locus:4515102740 | AT1G69572 | -
Length: 1241  
Chromosome Location: Chr1: 26161551-26162791
Organism . Short Name: A. thaliana
TAIR Computational Description: Natural antisense transcript overlaps with AT1G69570;(source:Araport11)
TAIR Curator Summary: Circadian regulated lncRNA, natural antisense gene of CDF5 (AT1G69570). Displays antiphasic expression pattern in relation to CDF5 expression (PMID:28758689).
TAIR Short Description: other RNA
TAIR Aliases: FLORE
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Gene
AT5G44110 | locus:2167644 | ABCI21 | ATP-binding cassette A21
Length: 1810  
Chromosome Location: Chr5: 17753959-17755768
Organism . Short Name: A. thaliana
TAIR Computational Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a member of the NAP subfamily of ABC transporters whose expression pattern is regulated by light and sucrose.
TAIR Short Description: P-loop containing nucleoside triphosphate hydrolases superfamily protein
TAIR Aliases: ABCI21, ATNAP2, ATPOP1, POP1
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GO Term
GO:0007389 | pattern specification process
Description: Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate.
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Publication
23496690
First Author: Logemann E
Title: Functional dissection of the PROPEP2 and PROPEP3 promoters reveals the importance of WRKY factors in mediating microbe-associated molecular pattern-induced expression.
Year: 2013
Journal: New Phytol
Volume: 198
Pages: 1165-1177
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Gene
AT5G60300 | locus:2144045 | LecRK-I.9 | lectin receptor kinase I.9
Length: 3542  
Chromosome Location: Chr5: 24264488-24268029
Organism . Short Name: A. thaliana
TAIR Computational Description: Concanavalin A-like lectin protein kinase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a legume-type lectin receptor kinase that is structurally distinct from the mammalian extracellular ATP receptors and acts as an extracellular ATP receptor in Arabidopsis. Extracellular ATP acts as a damage-associated molecular pattern in plants, and its signaling through P2K1 is important for mounting an effective defense response against various pathogenic microorganisms. It also plays a role in cell wall-plasma membrane adhesion.
TAIR Short Description: Concanavalin A-like lectin protein kinase family protein
TAIR Aliases: DORN1, LecRK-I.9, P2K1
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Gene
AT2G28000 | locus:2057841 | CPN60A | chaperonin-60alpha
Length: 3043  
Chromosome Location: Chr2: 11926446-11929488
Organism . Short Name: A. thaliana
TAIR Computational Description: chaperonin-60alpha;(source:Araport11)
TAIR Curator Summary: Encodes chaperonin-60 alpha, a molecular chaperone involved in Rubisco folding. Mutants display aberrant chloroplast and embryo development. The mRNA is cell-to-cell mobile.
TAIR Short Description: chaperonin-60alpha
TAIR Aliases: ARC2, CH-CPN60A, CPN60A, Cpn60alpha1, CPNA1, SLP
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Gene
AT1G79930 | locus:2016364 | HSP91 | heat shock protein 91
Length: 4142  
Chromosome Location: Chr1: 30063448-30067589
Organism . Short Name: A. thaliana
TAIR Computational Description: heat shock protein 91;(source:Araport11)
TAIR Curator Summary: encodes high molecular weight heat shock protein 70 not a HSP90 homolog, mRNA is constitutively expressed but transiently induced after heat shock
TAIR Short Description: heat shock protein 91
TAIR Aliases: AtHsp70-14, HSP91
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Protein
BAG7_ARATH | Q9LVA0
Organism . Name: Arabidopsis thaliana
Length: 446  
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Protein
A0A1I9LQM1_ARATH | A0A1I9LQM1
Organism . Name: Arabidopsis thaliana
Length: 67  
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Protein
BAG2_ARATH | Q0WPX7
Organism . Name: Arabidopsis thaliana
Length: 285  
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