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Search results 301 to 400 out of 2746 for Pattern triggered immunity

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Type Details Score
GO Term
GO:0072048 | renal system pattern specification
Description: Any developmental process that results in the creation of defined areas or spaces within an organism to which cells respond and eventually are instructed to differentiate into the anatomical structures of the renal system.
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GO Term
GO:0035018 | adult chitin-based cuticle pattern formation
Description: The process that gives rise to the patterns of cell differentiation that will arise in the chitin-based adult cuticle. An example of this process is adult chitin-based cuticle pattern formation in Drosophila melanogaster.
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GO Term
GO:0072196 | proximal/distal pattern formation involved in pronephric nephron development
Description: The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of the pronephros.
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Ontology Term Synonym
Ontology Term Synonym
Name: pronephros proximal/distal pattern formation
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: kidney anterior/posterior pattern specification
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: kidney anterior/posterior pattern formation
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: adult cuticle pattern formation
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: renal system pattern formation
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: forebrain anterior-posterior pattern specification
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: forebrain dorsal-ventral pattern formation
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: forebrain dorsoventral pattern formation
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: cerebral cortex pattern formation
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: cerebral cortex pattern biosynthesis
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: pathogen-associated molecular pattern signalling
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: anterior compartment pattern specification
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: vascular tissue pattern formation
Type: synonym
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GO Term
GO:0002714 | positive regulation of B cell mediated immunity
Description: Any process that activates or increases the frequency, rate, or extent of B cell mediated immunity.
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GO Term
GO:0002711 | positive regulation of T cell mediated immunity
Description: Any process that activates or increases the frequency, rate, or extent of T cell mediated immunity.
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GO Term
GO:0035663 | Toll-like receptor 2 binding
Description: Binding to a Toll-like 2 protein, a pattern recognition receptor that binds microbial pattern motifs to initiate an innate immune response.
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GO Term
GO:0002713 | negative regulation of B cell mediated immunity
Description: Any process that stops, prevents, or reduces the frequency, rate, or extent of B cell mediated immunity.
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GO Term
GO:0002710 | negative regulation of T cell mediated immunity
Description: Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell mediated immunity.
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Publication
15242620
First Author: Zilberman D
Title: Role of Arabidopsis ARGONAUTE4 in RNA-directed DNA methylation triggered by inverted repeats.
Year: 2004
Journal: Curr Biol
Volume: 14
Pages: 1214-20
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Publication
16916444
First Author: Wormuth D
Title: Regulation of gene expression by photosynthetic signals triggered through modified CO2 availability.
Year: 2006
Journal: BMC Plant Biol
Volume: 6
Pages: 15
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Publication
20206597
First Author: Barbin L
Title: The Cdc48-Ufd1-Npl4 complex is central in ubiquitin-proteasome triggered catabolite degradation of fructose-1,6-bisphosphatase.
Year: 2010
Journal: Biochem Biophys Res Commun
Volume: 394
Pages: 335-41
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GO Term
GO:0002888 | positive regulation of myeloid leukocyte mediated immunity
Description: Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte mediated immunity.
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Gene
AT2G35000 | locus:2044757 | ATL9 | Arabidopsis toxicos en levadura 9
Length: 1779  
Chromosome Location: Chr2: 14751541-14753319
Organism . Short Name: A. thaliana
TAIR Computational Description: RING/U-box superfamily protein;(source:Araport11)
TAIR Curator Summary: ATL9 is an E3 ligase-like protein that is induced by chitin oligomers and contributes to fungal resistance.It differs from other members of the ATL family in that it has a PEST domain. It is a short lived protein that is subject to proteosome mediated degradation. It is expressed in many aerial tissues in a pattern that varies with developmental stage.
TAIR Short Description: RING/U-box superfamily protein
TAIR Aliases: ATL2G, ATL9
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Gene
AT1G67070 | locus:2019748 | DIN9 | DARK INDUCIBLE 9
Length: 2827  
Chromosome Location: Chr1: 25041833-25044659
Organism . Short Name: A. thaliana
TAIR Computational Description: Mannose-6-phosphate isomerase, type I;(source:Araport11)
TAIR Curator Summary: Encodes a protein with phosphomannose isomerase activity that is involved in synthesis of ascorbic acid. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.
TAIR Short Description: Mannose-6-phosphate isomerase, type I
TAIR Aliases: DIN9, PMI2
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Gene
AT5G20250 | locus:2149284 | DIN10 | DARK INDUCIBLE 10
Length: 3299  
Chromosome Location: Chr5: 6833564-6836862
Organism . Short Name: A. thaliana
TAIR Computational Description: Raffinose synthase family protein;(source:Araport11)
TAIR Curator Summary: encodes a member of glycosyl hydrolase family 36. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. The mRNA is cell-to-cell mobile.
TAIR Short Description: Raffinose synthase family protein
TAIR Aliases: DIN10, RS6
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Gene
AT5G60300 | locus:2144045 | LecRK-I.9 | lectin receptor kinase I.9
Length: 3542  
Chromosome Location: Chr5: 24264488-24268029
Organism . Short Name: A. thaliana
TAIR Computational Description: Concanavalin A-like lectin protein kinase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a legume-type lectin receptor kinase that is structurally distinct from the mammalian extracellular ATP receptors and acts as an extracellular ATP receptor in Arabidopsis. Extracellular ATP acts as a damage-associated molecular pattern in plants, and its signaling through P2K1 is important for mounting an effective defense response against various pathogenic microorganisms. It also plays a role in cell wall-plasma membrane adhesion.
TAIR Short Description: Concanavalin A-like lectin protein kinase family protein
TAIR Aliases: DORN1, LecRK-I.9, P2K1
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GO Term
GO:0002703 | regulation of leukocyte mediated immunity
Description: Any process that modulates the frequency, rate, or extent of leukocyte mediated immunity.
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GO Term
GO:0002449 | lymphocyte mediated immunity
Description: Any process involved in the carrying out of an immune response by a lymphocyte.
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GO Term
GO:0002443 | leukocyte mediated immunity
Description: Any process involved in the carrying out of an immune response by a leukocyte.
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GO Term
GO:0002446 | neutrophil mediated immunity
Description: Any process involved in the carrying out of an immune response by a neutrophil.
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GO Term
GO:0002447 | eosinophil mediated immunity
Description: Any process involved in the carrying out of an immune response by an eosinophil.
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GO Term
GO:0002560 | basophil mediated immunity
Description: Any process involved in the carrying out of an immune response by a basophil.
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Protein Domain
IPR031373
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Gene
AT1G79090 | locus:2207400 | AT1G79090 | -
Length: 4230  
Chromosome Location: Chr1: 29749101-29753330
Organism . Short Name: A. thaliana
TAIR Computational Description: topoisomerase II-associated protein;(source:Araport11)
TAIR Curator Summary: Encodes a component of the mRNA decapping machinery that is found in complexes with and is phosphorylated by MPK4. The protein can be found in P-bodies after treatment with PAMPs. Pat1 mutants exhibit dwarfism and de-repressed immunity dependent on the immune receptor SUMM2. The pat1 constitutive defense phenotype is suppressed by summ2 such that pat1 summ2 mutants display a wild-type phenotype in response to biotrophic and necrotrophic pathogens.
TAIR Short Description: NULL
TAIR Aliases: PAT1
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Gene
AT5G60410 | locus:2175148 | SIZ1 | -
Length: 6454  
Chromosome Location: Chr5: 24294704-24301157
Organism . Short Name: A. thaliana
TAIR Computational Description: DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain-containing protein;(source:Araport11)
TAIR Curator Summary: Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling
TAIR Short Description: DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain
TAIR Aliases: ATSIZ1, SIZ1
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GO Term
GO:0021796 | cerebral cortex regionalization
Description: The regionalization process that results in the creation of areas within the cerebral cortex that will direct the behavior of cell migration and differentiation as the cortex develops.
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GO Term
GO:0140320 | PAMP receptor decoy activity
Description: Binding and sequestering PAMP ligands in order to prevent them from binding and activating to the host PAMP receptor. Usually this activity is encoded by a symbiont or a pathogen to prevent activation of the host innate immune response.
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Gene
AT3G48190 | locus:2100459 | ATM | ataxia-telangiectasia mutated
Length: 27265  
Chromosome Location: Chr3: 17801289-17828553
Organism . Short Name: A. thaliana
TAIR Computational Description: Serine/Threonine-kinase ATM-like protein;(source:Araport11)
TAIR Curator Summary: Encodes a homolog of the human ATM gene, which is mutated in ataxia telangiectasia, a chromosome instability disorder. Suppresses leaf senescence triggered by DNA double-strand break through epigenetic control of senescence-associated genes. Characterization of mutants suggest a role homologous recombination for DNA damage repair in response to ionizing radiation as well as during meiosis. The protein has kinase domains and shows kinase activity in orthologs. There is also evidence that ATM might be involved in the telomerase-independent process known as Alternative Lengthening of Telomeres.
TAIR Short Description: ataxia-telangiectasia mutated
TAIR Aliases: ATATM, ATM, PIG1
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Gene
AT5G46520 | locus:2151476 | AT5G46520 | -
Length: 4879  
Chromosome Location: Chr5: 18867616-18872494
Organism . Short Name: A. thaliana
TAIR Computational Description: Disease resistance protein (TIR-NBS-LRR class) family;(source:Araport11)
TAIR Curator Summary: VICTR (VARIATION IN COMPOUND TRIGGERED ROOT growth response) encodes a TIR-NB-LRR (for Toll-Interleukin1 Receptor-nucleotide binding-Leucine-rich repeat) protein. VICTR is necessary for DFPM-induced root growth arrest and inhibition of abscisic acid-induced stomatal closing (DFPM is [5-(3,4-dichlorophenyl)furan-2-yl]-piperidine-1-ylmethanethione)(PMID:21620700). DFPM-mediated root growth arrest is accession-specific and depends on EDS1 and PAD4; Col-0 has a functional copy of VICTR. Induction of the VICTR gene by DFPM treatment requires functional VICTR (Col). A close homolog to VICTR, named VICTL (At5g46510) lies in tandem with VICTR. The mRNA is cell-to-cell mobile.
TAIR Short Description: Disease resistance protein (TIR-NBS-LRR class) family
TAIR Aliases: ACQOS, VICTR
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GO Term
GO:0002887 | negative regulation of myeloid leukocyte mediated immunity
Description: Any process that stops, prevents, or reduces the frequency, rate, or extent of myeloid leukocyte mediated immunity.
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Protein Domain
IPR037433
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Gene
AT5G10510 | locus:2142534 | AIL6 | AINTEGUMENTA-like 6
Length: 4923  
Chromosome Location: Chr5: 3315401-3320323
Organism . Short Name: A. thaliana
TAIR Computational Description: AINTEGUMENTA-like 6;(source:Araport11)
TAIR Curator Summary: Encodes an AP2-domain transcription factor involved in root stem cell identity and root development. It is also required to maintain high levels of PIN1 expression at the periphery of the meristem and modulate local auxin production in the central region of the SAM which underlies phyllotactic transitions. Intronic sequences are required for its expression in flowers.Acts redundantly with PLT5 and 7 in lateral root pattern formation.
TAIR Short Description: AINTEGUMENTA-like 6
TAIR Aliases: AIL6, PLT3
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Gene
AT1G30950 | locus:2015766 | UFO | UNUSUAL FLORAL ORGANS
Length: 1517  
Chromosome Location: Chr1: 11035992-11037508
Organism . Short Name: A. thaliana
TAIR Computational Description: F-box family protein;(source:Araport11)
TAIR Curator Summary: Required for the proper identity of the floral meristem. Involved in establishing the whorled pattern of floral organs, in the control of specification of the floral meristem, and in the activation of APETALA3 and PISTILLATA. UFO is found at the AP3 promoter in a LFY-dependent manner, suggesting that it works with LFY to regulate AP3 expression. UFO may also promote the ubiquitylation of LFY.
TAIR Short Description: F-box family protein
TAIR Aliases: UFO
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Gene
AT3G06400 | locus:2081081 | CHR11 | chromatin-remodeling protein 11
Length: 6074  
Chromosome Location: Chr3: 1940907-1946980
Organism . Short Name: A. thaliana
TAIR Computational Description: chromatin-remodeling protein 11;(source:Araport11)
TAIR Curator Summary: Encodes a SWI2/SNF2 chromatin remodeling protein belonging to the ISWI family. Involved in nuclear proliferation during megagametogenesis and cell expansion in the sporophyte. Constitutively expressed. RNAi induced loss of function in megagametogenesis results in female sterility.35S:RNAi plants have reduced stature. Double mutation in CHR17 and CHR11 results in the loss of the evenly spaced nucleosome pattern in gene bodies, but does not affect nucleosome density.
TAIR Short Description: chromatin-remodeling protein 11
TAIR Aliases: CHR11
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Gene
AT5G39510 | locus:2175733 | SGR4 | SHOOT GRAVITROPSIM 4
Length: 2548  
Chromosome Location: Chr5: 15821293-15823840
Organism . Short Name: A. thaliana
TAIR Computational Description: Vesicle transport v-SNARE family protein;(source:Araport11)
TAIR Curator Summary: Encodes a member of SNARE gene family. Homologous with yeast VTI1 and is involved in vesicle transport. Mutant alleles such as sgr4/zig are defective in the shoots response to gravity resulting in a zigzag growth pattern of the stem. Involved in protein trafficking to lytic vacuoles. Can conditionally substitute VTI12 in protein storage vacuole trafficking when plants are devoid of VTI12. The mRNA is cell-to-cell mobile.
TAIR Short Description: Vesicle transport v-SNARE family protein
TAIR Aliases: ATVTI11, ATVTI1A, ITT3, SGR4, VTI11, VTI1A, ZIG, ZIG1
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GO Term
GO:0140423 | effector-mediated suppression of host pattern-triggered immunity signaling
Description: A process mediated by a molecule secreted by a symbiont that results in the suppression of a pattern-triggered immunity PTI signaling pathway. PTI signaling pathways are found in plants.
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Gene
AT4G33430 | locus:2119260 | BAK1 | BRI1-associated receptor kinase
Length: 4522  
Chromosome Location: Chr4: 16086311-16090832
Organism . Short Name: A. thaliana
TAIR Computational Description: BRI1-associated receptor kinase;(source:Araport11)
TAIR Curator Summary: Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. Contributes to postinvasive immunity against Alternaria brassicola.
TAIR Short Description: BRI1-associated receptor kinase
TAIR Aliases: ATBAK1, ATSERK3, BAK1, ELG, RKS10, SERK3
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Protein Domain
IPR015046
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Publication
22195582
First Author: Undurraga SF
Title: Arabidopsis sodium dependent and independent phenotypes triggered by H⁺-PPase up-regulation are SOS1 dependent.
Year: 2012
Journal: Plant Sci
Volume: 183
Pages: 96-105
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Publication
27149095
First Author: Fanourgakis G
Title: Chromatoid Body Protein TDRD6 Supports Long 3' UTR Triggered Nonsense Mediated mRNA Decay.
Year: 2016
Journal: PLoS Genet
Volume: 12
Pages: e1005857
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Gene
AT3G23900 | locus:2076121 | AT3G23900 | -
Length: 4585  
Chromosome Location: Chr3: 8631482-8636066
Organism . Short Name: A. thaliana
TAIR Computational Description: RNA recognition motif (RRM)-containing protein;(source:Araport11)
TAIR Curator Summary: Physically interacts with, and promotes canonical splicing of, transcripts encoding defense signaling proteins, including the key negative regulator of pattern recognition receptor signaling complexes, CALCIUM-DEPENDENT PROTEIN KINASE 28 (CPK28). Upon immune activation by Plant Elicitor Peptides (Peps), IRR is dephosphorylated, disrupting interaction with CPK28 transcripts and resulting in accumulation of an alternative splice variant encoding a truncated CPK28 protein with impaired kinase activity and diminished function as a negative regulator.
TAIR Short Description: RNA recognition motif (RRM)-containing protein
TAIR Aliases: IRR
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Gene
AT3G60140 | locus:2101427 | DIN2 | DARK INDUCIBLE 2
Length: 4285  
Chromosome Location: Chr3: 22216540-22220824
Organism . Short Name: A. thaliana
TAIR Computational Description: Glycosyl hydrolase superfamily protein;(source:Araport11)
TAIR Curator Summary: Encodes a protein similar to beta-glucosidase and is a member of glycoside hydrolase family 1. Expression is induced after 24 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell. The mRNA is cell-to-cell mobile.
TAIR Short Description: Glycosyl hydrolase superfamily protein
TAIR Aliases: BGLU30, DIN2, SRG2
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Gene
AT5G25220 | locus:2146945 | KNAT3 | KNOTTED1-like homeobox gene 3
Length: 2658  
Chromosome Location: Chr5: 8735944-8738601
Organism . Short Name: A. thaliana
TAIR Computational Description: homeobox protein knotted-1-like 3;(source:Araport11)
TAIR Curator Summary: A member of class II knotted1-like homeobox gene family (together with KNAT4 and KNAT5). Expressed in: hypocotyl-root boundary, anther-filament junction in flowers, ovule-funiculus and peduncle-silique boundaries, petioles and root. Light-regulated expression with differential response to red/far-red light. KNAT3 promoter activity showed cell-type specific pattern along longitudinal root axis, restricted mainly to the differentiation zone of the root, namely in the cortex and pericycle. Not detected in lateral root primordia
TAIR Short Description: KNOTTED1-like homeobox gene 3
TAIR Aliases: KNAT3
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GO Term
GO:0048094 | male pigmentation
Description: Establishment of a pattern of pigment in males.
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GO Term
GO:0048095 | female pigmentation
Description: Establishment of a pattern of pigment in females.
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Ontology Term Synonym
Ontology Term Synonym
Name: effector triggered modulation of host immune response by symbiont
Type: synonym
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Protein Domain
IPR025551
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Gene
AT3G49670 | locus:2097310 | BAM2 | BARELY ANY MERISTEM 2
Length: 3696  
Chromosome Location: Chr3: 18417568-18421263
Organism . Short Name: A. thaliana
TAIR Computational Description: Leucine-rich receptor-like protein kinase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM1,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM2 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs. The mRNA is cell-to-cell mobile.
TAIR Short Description: Leucine-rich receptor-like protein kinase family protein
TAIR Aliases: BAM2
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Gene
AT5G65700 | locus:2169965 | BAM1 | BARELY ANY MERISTEM 1
Length: 3772  
Chromosome Location: Chr5: 26281642-26285413
Organism . Short Name: A. thaliana
TAIR Computational Description: Leucine-rich receptor-like protein kinase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a CLAVATA1-related receptor kinase-like protein required for both shoot and flower meristem function. Very similar to BAM2,with more than 85% a.a. identity. It has a broad expression pattern and is involved in vascular strand development in the leaf, control of leaf shape, size and symmetry, male gametophyte development and ovule specification and function. Anthers of double mutants (bam1bam2) appeared abnormal at a very early stage and lack the endothecium, middle, and tapetum layers. Further analyses revealed that cells interior to the epidermis (in anther tissue) acquire some characteristics of pollen mother cells (PMCs), suggesting defects in cell fate specification. The pollen mother-like cells degenerate before the completion of meiosis, suggesting that these cells are defective. In addition, the BAM1 expression pattern supports both an early role in promoting somatic cell fates and a subsequent function in the PMCs. The mRNA is cell-to-cell mobile.
TAIR Short Description: Leucine-rich receptor-like protein kinase family protein
TAIR Aliases: BAM1
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: NPR1 is not necessary for resistance triggered by methyl jasmonate.
Organism: A. thaliana
Gene: NPR1
PubMed Id: 23116333
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Gene
AT5G62880 | locus:2170778 | RAC10 | RAC-like 10
Length: 2318  
Chromosome Location: Chr5: 25236945-25239262
Organism . Short Name: A. thaliana
TAIR Computational Description: RAC-like 10;(source:Araport11)
TAIR Curator Summary: ROP (Rho of plant GTPases) family member involved in cell wall patterning. Locally activated to form plasma membrane domains, which direct formation of cell wall pits in metaxylem vessel cells through interaction with cortical microtubules. Pattern formation of cell wall pits is governed by ROP activation via a reaction-difusion mechanism. Patterning involves active ROP1 recruiting BDR1 to the plasma membrane in pit regions. BRD1 in turn recruits the actin binding protein WAL.
TAIR Short Description: RAC-like 10
TAIR Aliases: ARAC10, ATRAC10, ATROP11, RAC10, ROP11
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Gene
AT2G21120 | locus:2047112 | AT2G21120 | -
Length: 3097  
Chromosome Location: Chr2: 9051725-9054821
Organism . Short Name: A. thaliana
TAIR Computational Description: magnesium transporter, putative (DUF803);(source:Araport11)
TAIR Curator Summary: Encodes a putative magnesium transporter that was identified through a forward genetic screen, directly isolating antiviral RNAi-defective (avi) mutant using a Cucumber Mosaic Virus (CMV) mutant. Compared to Wildtype Col-0, avi2 mutant showed severe disease symptom after viral infection and viral accumulation was significantly increased while viral siRNAs and virus-activated endogenous siRNAs (vasiRNAs) were reduced in avi2 mutant. Detailed genetic study indicated that AVI2 modulated RNAi-mediated antiviral immunity by regulating the biogenesis of secondary viral siRNAs and vasiRNAs in Arabidopsis.
TAIR Short Description: Protein of unknown function (DUF803)
TAIR Aliases: AVI2, ENOR3
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Gene
AT3G43300 | locus:2084706 | ATMIN7 | HOPM interactor 7
Length: 11437  
Chromosome Location: Chr3: 15233845-15245281
Organism . Short Name: A. thaliana
TAIR Computational Description: HOPM interactor 7;(source:Araport11)
TAIR Curator Summary: AtMIN7 is an immunity associated Arabidopsis protein targeted by HopM1, a conserved Pseudomonas syringae virulence protein. AtMIN7 encodes one of the eight members of the Arabidopsis adenosine diphosphate (ADP) ribosylation factor (ARF) guanine nucleotide exchange factor (GEF) protein family. The AFR GEF proteins are key components of the vesicle trafficking system in eukaryotic cells. HopM1 mediates the destruction of AtMIN7 via the host proteasome. Critical for cuticle formation and related leaf surface defense against the bacterial pathogen Pseudomonas syringae pathovar tomato (Pto).
TAIR Short Description: HOPM interactor 7
TAIR Aliases: ATMIN7, BEN1, BIG5, MIN7
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Gene
AT1G29690 | locus:2013673 | CAD1 | constitutively activated cell death 1
Length: 3134  
Chromosome Location: Chr1: 10379020-10382153
Organism . Short Name: A. thaliana
TAIR Computational Description: MAC/Perforin domain-containing protein;(source:Araport11)
TAIR Curator Summary: Encodes a protein containing a domain with significant homology to the MACPF (membrane attack complex and perforin) domain of complements and perforin proteins that are involved in innate immunity in animals. Transgenic cad1-1 mutant plants show lesions seen in the hypersensitive response, as well as a spontaneous activation of expression of pathogenesis-related genes and leading to a 32-fold increase in salicylic acid (SA). CAD1 is postulated to act as a negative regulator controlling SA-mediated pathway of programmed cell death in plant immunity.
TAIR Short Description: MAC/Perforin domain-containing protein
TAIR Aliases: CAD1, NSL2
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GO Term
GO:0035325 | Toll-like receptor binding
Description: Binding to a Toll-like protein, a pattern recognition receptor that binds pattern motifs from a variety of microbial sources to initiate an innate immune response.
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Protein Domain
IPR036471
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Gene
AT3G47340 | locus:2099580 | ASN1 | glutamine-dependent asparagine synthase 1
Length: 3592  
Chromosome Location: Chr3: 17437840-17441431
Organism . Short Name: A. thaliana
TAIR Computational Description: glutamine-dependent asparagine synthase 1;(source:Araport11)
TAIR Curator Summary: encodes a glutamine-dependent asparagine synthetase, the predicted ASN1 peptide contains a purF-type glutamine-binding domain, and is expressed predominantly in shoot tissues, where light has a negative effect on its mRNA accumulation. Expression is induced within 3 hours of dark treatment, in senescing leaves and treatment with exogenous photosynthesis inhibitor. Induction of gene expression was suppressed in excised leaves supplied with sugar. The authors suggest that the gene's expression pattern is responding to the level of sugar in the cell.
TAIR Short Description: glutamine-dependent asparagine synthase 1
TAIR Aliases: ASN1, AT-ASN1, DIN6
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Gene
AT5G02010 | locus:2185153 | ROPGEF7 | ROP (rho of plants) guanine nucleotide exchange factor 7
Length: 2758  
Chromosome Location: Chr5: 383153-385910
Organism . Short Name: A. thaliana
TAIR Computational Description: RHO guanyl-nucleotide exchange factor 7;(source:Araport11)
TAIR Curator Summary: Encodes a member of KPP-like gene family, homolog of KPP (kinase partner protein) gene in tomato. Also a member of the RopGEF (guanine nucleotide exchange factor) family, containing the novel PRONE domain (plant-specific Rop nucleotide exchanger), which is exclusively active towards members of the Rop subfamily. Involved in cell wall patterning. Encodes ROP activator, regulates the formation of ROP-activated domains; these in turn determine the pattern of cell wall pits. Required for periodic formation of secondary cell wall pits.
TAIR Short Description: RHO guanyl-nucleotide exchange factor 7
TAIR Aliases: ATROPGEF7, ROPGEF7
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Gene
AT5G60100 | locus:2164160 | PRR3 | pseudo-response regulator 3
Length: 3445  
Chromosome Location: Chr5: 24197971-24201415
Organism . Short Name: A. thaliana
TAIR Computational Description: pseudo-response regulator 3;(source:Araport11)
TAIR Curator Summary: Encodes pseudo-response regulator 3 (APRR3/PRR3). PRR3 transcript levels vary in a circadian pattern with peak expression at dusk under long and short day conditions. PRR3 affects the period of the circadian clock and seedlings with reduced levels of PRR3 have shorter periods, based on transcriptional assays of clock-regulated genes. PRR3 is expressed in the vasculature of cotyledons and leaves where it may help stabilize the TOC1 protein by preventing interactions between TOC1 and the F-box protein ZTL.
TAIR Short Description: pseudo-response regulator 3
TAIR Aliases: APRR3, PRR3
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Ontology Term Synonym
Ontology Term Synonym
Name: induction of host innate immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: regulation of B-cell mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: regulation of B-lymphocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: regulation of leucocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: down-regulation of leukocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: downregulation of leukocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: inhibition of leukocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: stimulation of leukocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: up-regulation of leukocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: upregulation of leukocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: activation of leukocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: down-regulation of lymphocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: downregulation of lymphocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: inhibition of lymphocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: activation of lymphocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: stimulation of lymphocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: upregulation of lymphocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: up-regulation of lymphocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: regulation of T-cell mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: regulation of T-lymphocyte mediated immunity
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: induction of effector-triggered immunity (ETI)
Type: synonym
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Ontology Term Synonym
Ontology Term Synonym
Name: effector-mediated modulation of host immunity
Type: synonym
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Gene
AT4G12020 | locus:2118116 | WRKY19 | -
Length: 8171  
Chromosome Location: Chr4: 7201522-7209692
Organism . Short Name: A. thaliana
TAIR Computational Description: protein kinase family protein;(source:Araport11)
TAIR Curator Summary: Encodes a member of the A1 subgroup of the MEKK (MAPK/ERK kinase kinase) family. MEKK is another name for Mitogen-Activated Protein Kinase Kinase Kinase (MAPKKK or MAP3K). This subgroup has four members: At4g08500 (MEKK1, also known as ARAKIN, MAP3Kb1, MAPKKK8), At4g08480 (MEKK2, also known as MAP3Kb4, MAPKKK9), At4g08470 (MEKK3, also known as MAP3Kb3, MAPKKK10) and At4g12020 (MEKK4, also known as MAP3Kb5, MAPKKK11, WRKY19). Nomenclatures for mitogen-activated protein kinases are described in Trends in Plant Science 2002,7(7):301. Co-regulates with DSC1 basal levels of immunity to root-knot nematodes.
TAIR Short Description: protein kinase family protein
TAIR Aliases: ATWRKY19, MAPKKK11, MEKK4, WRKY19
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Protein Domain
IPR040547
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: ULT1 and KAN1 acting antagonistically to pattern the adaxial-abaxial polarity axis but jointly to pattern the apical-basal axis.
Organism: A. thaliana
Gene: ULT1
PubMed Id: 25381352
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: ULT1 and KAN1 acting antagonistically to pattern the adaxial-abaxial polarity axis but jointly to pattern the apical-basal axis.
Organism: A. thaliana
Gene: KAN
PubMed Id: 25381352
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Publication
3318666
First Author: Boman HG
Title: Cell-free immunity in insects.
Year: 1987
Journal: Annu Rev Microbiol
Volume: 41
Pages: 103-26
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Publication
7772280
First Author: Hoffmann JA
Title: Innate immunity of insects.
Year: 1995
Journal: Curr Opin Immunol
Volume: 7
Pages: 4-10
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