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Search results 2201 to 2300 out of 2746 for Pattern triggered immunity

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Type Details Score
Protein Domain
IPR005838
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Protein Domain
IPR036139
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Protein Domain
IPR000275
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Protein Domain
IPR034552
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Protein Domain
IPR034558
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GO Term
GO:0060897 | neural plate regionalization
Description: The pattern specification process that results in the subdivision of an axis or axes of the neural plate in space to define an area or volume in which specific patterns of cell differentiation will take place or in which cells interpret a specific environment.
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GO Term
GO:0060888 | limb epidermis stratification
Description: The pattern specification process that results in the subdivision of the epidermis of the limb in space to define a volume in which specific patterns of basal cell, spinous cell and granular cells will differentiate giving rise to the layers of the limb epidermis.
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Publication
25226540
First Author: Bie B
Title: Ectopic expression of CsCTR1, a cucumber CTR-like gene, attenuates constitutive ethylene signaling in an Arabidopsis ctr1-1 mutant and expression pattern analysis of CsCTR1 in cucumber (Cucumis sativus).
Year: 2014
Journal: Int J Mol Sci
Volume: 15
Pages: 16331-50
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: TFL1 can act outside of its normal expression domain in leaf primordia or floral meristems to repress flower identity. These data show how the timing and spatial pattern of TFL1 expression affect overall plant architecture.
Organism: A. thaliana
Gene: TFL1
PubMed Id: 26019254
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Interaction Experiment
Interaction Experiment
Name: Maruta N (2015)
Description: Membrane-localized extra-large G proteins and Gbg of the heterotrimeric G proteins form functional complexes engaged in plant immunity in Arabidopsis.
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Publication
22694952
First Author: Sumit R
Title: Arabidopsis nonhost resistance gene PSS1 confers immunity against an oomycete and a fungal pathogen but not a bacterial pathogen that cause diseases in soybean.
Year: 2012
Journal: BMC Plant Biol
Volume: 12
Pages: 87
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Publication
19671880
First Author: Luo Y
Title: Proteolysis of a negative regulator of innate immunity is dependent on resistance genes in tomato and Nicotiana benthamiana and induced by multiple bacterial effectors.
Year: 2009
Journal: Plant Cell
Volume: 21
Pages: 2458-72
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The pdlp1,2,3 triple mutant is more susceptible to Hyaloperonospora arabidopsidis (Hpa) while overexpression of PDLP1 enhances plant resistance, suggesting that PDLPs enhance basal immunity against Hpa.
Organism: A. thaliana
Gene: PDLP3
PubMed Id: 25393742
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: critical role in manipulating plant photosynthetic activities to promote ROS accumulation in chloroplasts and hypersensitive response cell death, which contributes to the robustness of effector-triggered immunity
Organism: A. thaliana
Gene: MPK6
PubMed Id: 29723186
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: critical role in manipulating plant photosynthetic activities to promote ROS accumulation in chloroplasts and hypersensitive response cell death, which contributes to the robustness of effector-triggered immunity
Organism: A. thaliana
Gene: MPK3
PubMed Id: 29723186
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: regulation of NPR1 is through the opposing action of S-nitrosoglutathione and thioredoxins; findings suggest a link between pathogen-triggered redox changes and gene regulation in plant immunity
Organism: A. thaliana
Gene: TRX3
PubMed Id: 18635760
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The pdlp1,2,3 triple mutant is more susceptible to Hyaloperonospora arabidopsidis (Hpa) while overexpression of PDLP1 enhances plant resistance, suggesting that PDLPs enhance basal immunity against Hpa.
Organism: A. thaliana
Gene: PDLP1
PubMed Id: 25393742
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The pdlp1,2,3 triple mutant is more susceptible to Hyaloperonospora arabidopsidis (Hpa) while overexpression of PDLP1 enhances plant resistance, suggesting that PDLPs enhance basal immunity against Hpa.
Organism: A. thaliana
Gene: PDLP2
PubMed Id: 25393742
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: regulation of NPR1 is through the opposing action of S-nitrosoglutathione and thioredoxins; findings suggest a link between pathogen-triggered redox changes and gene regulation in plant immunity
Organism: A. thaliana
Gene: TRX5
PubMed Id: 18635760
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: regulation of NPR1 is through the opposing action of S-nitrosoglutathione and thioredoxins; findings suggest a link between pathogen-triggered redox changes and gene regulation in plant immunity
Organism: A. thaliana
Gene: NPR1
PubMed Id: 18635760
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Overexpression of PDLP5 induces spontaneous cell death and chlorosis. PDLP5 modulates both basal and induced plasmodesmata permeability. It is linked to innate immunity against bacterial pathogens.
Organism: A. thaliana
Gene: HWI1
PubMed Id: 21934146
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Ontology Term
- | Evasion of host immunity by viral interleukin-like protein
Description: Viral protein sharing sequence homology with host interleukins Interleukins are produced by immune system cells such as lymphocytes, macrophages and monocytes, and modulate inflammation and immunity by regulating growth, mobility and differentiation of lymphoid and other cells. Several viruses encode interleukin-like proteins playing a role in immune evasion. Additionally, viral interleukins have been shown to activate cellular signaling cascades that enhance virus replication
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Ontology Term
- | Inhibition of host NF-kappa-B by virus
Description: Viral protein involved in the inhibition of host NF-kappa-B. This protein is a pleiotropic transcription factor which is present in almost all cell types and is involved in many biological processes such as inflammation, immunity, differentiation, cell growth, tumorigenesis and apoptosis. Many viruses have developed strategies to inhibit the NF-kappa-B pathway in order to evade host immunity and inhibit production of proinflammatory cytokines
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Protein Domain
IPR024603
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Protein Domain
IPR018848
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Protein Domain
IPR034033
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Protein Domain
IPR020128
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Protein Domain
IPR019828
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Protein Domain
IPR019806
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Protein Domain
IPR003718
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Protein Domain
IPR029790
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Protein Domain
IPR037227
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Protein Domain
IPR014712
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Protein Domain
IPR000239
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Protein Domain
IPR023418
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Protein Domain
IPR021025
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Protein Domain
IPR043017
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Protein Domain
IPR018312
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Protein Domain
IPR020427
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Protein Domain
IPR020462
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Protein Domain
IPR020412
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Protein Domain
IPR020451
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Protein Domain
IPR003403
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Protein Domain
IPR036543
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Protein Domain
IPR023193
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GO Term
GO:0060106 | cortical layer of collagen and cuticulin-based cuticle extracellular matrix
Description: The cuticle layer that lies directly beneath the lipid-containing epicuticle. The cortical layer contains collagens and insoluble, non-collagenous cuticulins and is characterized by a distinct annular pattern consisting of regularly spaced annular ridges delineated by annular furrows. An example of this component is found in Caenorhabditis elegans.
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: HBI1, as a component of the central growth regulation circuit, functions as a major node of crosstalk that mediates a trade-off between growth and immunity in plants.[HBI1]
Organism: A. thaliana
Gene: HBI1
PubMed Id: 24550223
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Our findings identify that VPS37-1, and likewise VPS28-2, regulate late FLS2 endosomal sorting and reveals that ESCRT-I is critical for flg22-activated stomatal defenses involved in plant immunity
Organism: A. thaliana
Gene: FLS2
PubMed Id: 24385929
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Publication
24443525
First Author: Malinovsky FG
Title: Antagonistic regulation of growth and immunity by the Arabidopsis basic helix-loop-helix transcription factor homolog of brassinosteroid enhanced expression2 interacting with increased leaf inclination1 binding bHLH1.
Year: 2014
Journal: Plant Physiol
Volume: 164
Pages: 1443-55
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Publication
9371832
First Author: Li J
Title: Inactivation of the alpha C protein antigen gene, bca, by a novel shuttle/suicide vector results in attenuation of virulence and immunity in group B Streptococcus.
Year: 1997
Journal: Proc Natl Acad Sci U S A
Volume: 94
Pages: 13251-6
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Here the authors show that only mtp8-2 has an altered manganese distribution pattern in seeds. They also show that MTP8 can transport iron and is responsible for localization of iron to the same cells that store manganese.
Organism: A. thaliana
Gene: AT3G58060
PubMed Id: 28887568
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Plants lacking IM have enhanced rates of carbon assimilation with corresponding increases in the activities of Rubisco and SPS, elevated starch and sucrose pool sizes, and an altered pattern of carbohydrate partitioning that favors sucrose over starch.
Organism: A. thaliana
Gene: IM
PubMed Id: 17342448
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GO Term
GO:0034050 | programmed cell death induced by symbiont
Description: Cell death resulting from activation of endogenous cellular processes after interaction with a symbiont (defined as the smaller of two, or more, organisms engaged in symbiosis, a close interaction encompassing mutualism through parasitism). This can be triggered by direct interaction with the organism, for example, contact with penetrating hyphae of a fungus; or an indirect interaction such as symbiont-secreted molecules.
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GO Term
GO:0097071 | interferon regulatory factor complex
Description: A protein complex that consists of two interferon regulatory proteins (IRFs); may be homodimeric or heterodimeric. The activation of a latent closed conformation of IRF in the cytoplasm is triggered by phosphorylation of Ser/Thr residues in a C-terminal region. Phosphorylation stimulates the C-terminal autoinhibitory domain to attain a highly extended conformation triggering dimerization through extensive contacts to a second subunit.
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Protein Domain
IPR034057
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Protein Domain
IPR037003
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Protein Domain
IPR037168
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Protein Domain
IPR014773
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Protein Domain
IPR034522
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Protein Domain
IPR034523
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Protein Domain
IPR004094
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Protein Domain
IPR004146
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Protein Domain
IPR036883
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Protein Domain
IPR044413
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Protein Domain
IPR019518
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Protein Domain
IPR019834
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Protein Domain
IPR013105
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Protein Domain
IPR000160
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Protein Domain
IPR002836
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Protein Domain
IPR018072
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Protein Domain
IPR022356
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Protein Domain
IPR009830
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Protein Domain
IPR044383
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Protein Domain
IPR046876
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Protein Domain
IPR045165
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Protein Domain
IPR042142
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Protein Domain
IPR040641
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Protein Domain
IPR005502
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Protein Domain
IPR038795
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Protein Domain
IPR003877
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Protein Domain
IPR042747
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Protein Domain
IPR009101
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: A calcium-regulated protein kinase Calcineurin B-like protein (CBL)-interacting protein kinase 6 (CIPK6) functions as a negative regulator of immunity against the bacterial pathogen Pseudomonas syringae in Arabidopsis thaliana.
Organism: A. thaliana
Gene: SIP3
PubMed Id: 28541442
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UniProt Feature
UniProt Feature
Begin: 118
Description: Abolishes kinase activity. Abolishes PCRK1 function in pattern-triggered immunity (PTI).
Type: mutagenesis site
End: 118
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Interaction Term
MI:0888 | small angle neutron scattering
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Publication
19494299
First Author: Gong YF
Title: CD154-CD40 interactions are essential for thymus-dependent antibody production in zebrafish: insights into the origin of costimulatory pathway in helper T cell-regulated adaptive immunity in early vertebrates.
Year: 2009
Journal: J Immunol
Volume: 182
Pages: 7749-62
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: The se-1 mutation in the serrate gene dramatically affects both changes in the leaf development pattern and the response to reduced incident light; virtual plants helped to reveal the combined effects of the multiple changes induced by this mutation.
Organism: A. thaliana
Gene: SE
PubMed Id: 17635222
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data reveal that PAMP-triggered immunity (PTI) relies on ligand-induced recruitment of SERK3/4 and provides insight into the early PTI signaling events underlying this important layer of plant innate immunity.
Organism: A. thaliana
Gene: SERK4
PubMed Id: 21693696
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: NLRs SZE1 and SZE2 interact with HopZ1a and function together with ZED1 to change the intramolecular interactions of ZAR1, leading to its activation, which is critical for HopZ1a-triggered immunity
Organism: A. thaliana
Gene: ZAR1
PubMed Id: 30947022
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GeneRIF (Gene Reference into Function)
GeneRIF (Gene Reference into Function)
Annotation: Data reveal that PAMP-triggered immunity (PTI) relies on ligand-induced recruitment of SERK3/4 and provides insight into the early PTI signaling events underlying this important layer of plant innate immunity.
Organism: A. thaliana
Gene: BAK1
PubMed Id: 21693696
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Protein Domain
IPR020003
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Protein Domain
IPR018446
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Protein Domain
IPR004177
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Protein Domain
IPR012999
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Protein Domain
IPR034922
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Protein Domain
IPR007604
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Protein Domain
IPR019802
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Protein Domain
IPR018507
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Protein Domain
IPR012839
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Protein Domain
IPR017517
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