NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Title:Investigating the links between organic acid and carbohydrate regulation of gene expression.
Description:Arabidopsis acetate non-utilizing mutants were isolated based on fluoroacetate resistant germination. Interestingly, a number of these mutants exhibited altered developmental characteristics in response to exogenous sucrose supply, such as bleaching of the cotyledons. A preliminary microarray experiment has already been conducted on one of the mutants, acn1-2. The gene expression analysis was done using 3 day-old seedlings of acn1-2 and the parent, Col-7, which were germinated on agar plates with and without exogenous sucrose. A cross-comparison of acn1-2 and Col-7 revealed that the expression of a number of carbohydrate responsive genes was altered in the mutant. The request for further microarray analysis is to confirm this result.
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
Greville_A-01-grevi-CC1_SLD519whole seedling N3731Greville_A-01-CC1_Rep1_ATH1.cel
Greville_A-02-grevi-CC2_SLD520whole seedling N3731Greville_A-02-CC2_Rep2_ATH1.cel
Greville_A-03-grevi-CC3_SLD521whole seedling N3731Greville_A-03-CC3_Rep3_ATH1.cel
Greville_A-04-grevi-AC1_SLD522col-7whole seedling Greville_A-04-AC1_Rep1_ATH1.cel
Greville_A-05-grevi-AC2_SLD523col-7whole seedling Greville_A-05-AC2_Rep2_ATH1.cel
Greville_A-06-grevi-AC3_SLD524col-7whole seedling Greville_A-06-AC3_Rep3_ATH1.cel
Greville_A-07-grevi-CT1_SLD525whole seedling N3731Greville_A-07-CT1_Rep1_ATH1.cel
Greville_A-08-grevi-CT2_SLD526whole seedling N3731Greville_A-08-CT2_Rep2_ATH1.cel
Greville_A-09-grevi-CT3_SLD527whole seedling N3731Greville_A-09-CT3_Rep3_ATH1.cel
Greville_A-10-grevi-AT1_SLD618col-7whole seedling Greville_A-10-AT1_Rep1_ATH1.cel
Greville_A-11-grevi-AT2_SLD619col-7whole seedling Greville_A-11-AT2_Rep2_ATH1.cel
Greville_A-12-grevi-AT3_SLD620col-7whole seedling Greville_A-12-AT3_Rep3_ATH1.cel