NASCArrays Information at The BAR
NASCArrays Information at The BAR
Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed
from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the
experiment number. To download the CEL files, please click on the ftp link.
| Experiment: | 622 |
| Title: | Transcriptomic analysis of inducible RNAi transgenic plants |
| Date: | 2012-10-24 |
| Description: | The objective of this experiment is to proof the concept of tetrapyrrole-mediated signaling by analysis of the primary response on nuclear transcription by using an inducible transgene expression system. Transgenic plants with chemical induced silencing (RNAi) of genes encoding enzymes of the Mg branch (chlH, chlM, chl27) will allow us to explore time-resolved early variations of nuclear gene expression upon induced changes of activities of these specific steps in the chlorophyll-synthesizing branch of tetrapyrrole biosynthesis.For transcriptome analysis we used green tissue of three weeks old arabidopsis seedlings treated with dexamethasone for 24 h. The seedlings were grown in little pots on soil under the same conditions. |
| ftp Link: | ftp Link |
| Slide ID | Slide Name | Genetic Background | Tissue | Stock Code | Cel File |
|---|---|---|---|---|---|
| Salinas-Hartwig_622-1_Col-0_Rep1_ATH1 | 7780685 | Salinas-Hartwig_622-1_Col-0_Rep1_ATH1.CEL | |||
| Salinas-Hartwig_622-2_Col-0_Rep2_ATH1 | 7780684 | Salinas-Hartwig_622-2_Col-0_Rep2_ATH1.CEL | |||
| Salinas-Hartwig_622-3_ChlH-RNAi_Rep1_ATH1 | 7780683 | Salinas-Hartwig_622-3_ChlH-RNAi_Rep1_ATH1.CEL | |||
| Salinas-Hartwig_622-4_ChlH-RNAi_Rep2_ATH1 | 7780682 | Salinas-Hartwig_622-4_ChlH-RNAi_Rep2_ATH1.CEL | |||
| Salinas-Hartwig_622-5_ChlM-RNAi _Rep1_ATH1 | 7780681 | Salinas-Hartwig_622-5_ChlM-RNAi _Rep1_ATH1.CEL | |||
| Salinas-Hartwig_622-6_ChlM-RNAi _Rep2_ATH1 | 7780680 | Salinas-Hartwig_622-6_ChlM-RNAi _Rep2_ATH1.CEL | |||
| Salinas-Hartwig_622-7_Chl27-RNAi_Rep1_ATH1 | 7780679 | Salinas-Hartwig_622-7_Chl27-RNAi_Rep1_ATH1.CEL | |||
| Salinas-Hartwig_622-8_Chl27-RNAi_Rep2_ATH1 | 7780678 | Salinas-Hartwig_622-8_Chl27-RNAi_Rep2_ATH1.CEL |