NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Experiment:603
Title:Compound induction
Date:2012-05-23
Description:wildtype Arabidopsis thaliana (ecotype:columbia) seedlings were induced with compound 5 and B at day 2 to form Somatic embryos. 2.4-D was present from the beginning. After 8 hour induction total seedlings were harvest and total RNA was isolated. The aim of this experiment is to see which genes are upregulated compared to a previous experiment were seedlings were induced with DMSO (control) and C3.
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
Stekelenburg_603-1_compound-5_Rep1_ATH17780535whole plant N1092Stekelenburg_603-1_compound-5_Rep1_ATH1.CEL
Treatment: at day 2 25µM Compound 3 was added for 8 hours
Stekelenburg_603-2_compound-5_Rep2_ATH17780536whole plant N1092Stekelenburg_603-2_compound-5_Rep2_ATH1.CEL
Treatment: at day 2 25µM Compound 3 was added for 8 hours
Stekelenburg_603-3_compound-5_Rep3_ATH17780537whole plant N1092Stekelenburg_603-3_compound-5_Rep3_ATH1.CEL
Treatment: at day 2 25µM Compound 3 was added for 8 hours
Stekelenburg_603-4_compound-B_Rep1_ATH17780538whole plant N1092Stekelenburg_603-4_compound-B_Rep1_ATH1.CEL
Treatment: at day 2 DMSO was added for 8 hours
Stekelenburg_603-5_compound-B_Rep2_ATH17780539whole plant N1092Stekelenburg_603-5_compound-B_Rep2_ATH1.CEL
Treatment: at day 2 DMSO was added for 8 hours
Stekelenburg_603-6_compound-B_Rep3_ATH17780540whole plant N1092Stekelenburg_603-6_compound-B_Rep3_ATH1.CEL
Treatment: at day 2 DMSO was added for 8 hours