NASCArrays Information at The BAR
NASCArrays Information at The BAR
Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed
from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the
experiment number. To download the CEL files, please click on the ftp link.
| Experiment: | 580 |
| Title: | Exogenous glucose treatment for Arabidopsis thaliana seedlings (Col-0) |
| Date: | 2012-05-21 |
| Description: | Glucose regulation of auxin (IAA) synthesis has recently been suggested in Maize (LeClere et al. 2010). The experiment in hand involves long glucose treatment of wild-type Arabidopsis thaliana seedlings. The purpose of the gene chip analysis is to pinpoint carbohydrate-regulated genes which are involved in IAA homeostasis and to monitor the metabolic status of the seedlings during the incubation with/without glucose.Wild type Arabidopsis thaliana (Col-0) seedlings were grown on 1% agarose plates (pH 5.7) under long day light period for 10 days. On day 10, one hour after the onset of light, the seedlings were transferred into liquid MS (1x, pH 5.7). After four hours of incubation in the dark, a treatment meant to drain the soluable carbohydrate pools of the plants, the material was transferred into liquid media (1xMS, ph 5.7) with varying amounts of glucose (0%, 1%, 5%). Pooled samples of approximately 30-50 whole seedlings were harvested at the point of glucose application (t0) and after 15 hours of incubation (t15) with/without exogenous glucose.LeClere et al. Plant Physiology (2010) 153, 306-318. |
| ftp Link: | ftp Link |
| Slide ID | Slide Name | Genetic Background | Tissue | Stock Code | Cel File |
|---|---|---|---|---|---|
| Ljung_580-10_19_15h_5per-glucose_Rep2_ATH1 | 7780286 | Ljung_580-10_19_15h_5per-glucose_Rep2_ATH1.CEL | |||
| Ljung_580-11_23_15h_5per-glucose_Rep3_ATH1 | 7780287 | Ljung_580-11_23_15h_5per-glucose_Rep3_ATH1.CEL | |||
| Ljung_580-12_4_15h_5per-glucose_Rep4_ATH1 | 7780288 | Ljung_580-12_4_15h_5per-glucose_Rep4_ATH1.CEL | |||
| Ljung_580-13_16_15h_0per-glucose_Rep1_ATH1 | 7780289 | Ljung_580-13_16_15h_0per-glucose_Rep1_ATH1.CEL | |||
| Ljung_580-14_13_15h_0per-glucose_Rep2_ATH1 | 7780290 | Ljung_580-14_13_15h_0per-glucose_Rep2_ATH1.CEL | |||
| Ljung_580-15_20_15h_0per-glucose_Rep3_ATH1 | 7780291 | Ljung_580-15_20_15h_0per-glucose_Rep3_ATH1.CEL | |||
| Ljung_580-16_9_15h_0per-glucose_Rep4_ATH1 | 7780292 | Ljung_580-16_9_15h_0per-glucose_Rep4_ATH1.CEL | |||
| Ljung_580-1_3_0h_sugar__Rep1_ATH1 | 7780277 | Ljung_580-1_3_0h_sugar__Rep1_ATH1_2.CEL | |||
| Ljung_580-2_1_0h_sugar_Rep2_ATH1 | 7780278 | Ljung_580-2_1_0h_sugar_Rep2_ATH1.CEL | |||
| Ljung_580-3_24_0h_sugar_Rep3_ATH1 | 7780279 | Ljung_580-3_24_0h_sugar_Rep3_ATH1.CEL | |||
| Ljung_580-4_12_0h_sugar_Rep4_ATH1 | 7780280 | Ljung_580-4_12_0h_sugar_Rep4_ATH1.CEL | |||
| Ljung_580-5_10_15h_1per-glucose_Rep1_ATH1 | 7780281 | Ljung_580-5_10_15h_1per-glucose_Rep1_ATH1.CEL | |||
| Ljung_580-6_18_15h_1per-glucose_Rep2_ATH1 | 7780282 | Ljung_580-6_18_15h_1per-glucose_Rep2_ATH1.CEL | |||
| Ljung_580-7_8_15h_1per-glucose_Rep3_ATH1 | 7780283 | Ljung_580-7_8_15h_1per-glucose_Rep3_ATH1.CEL | |||
| Ljung_580-8_22_15h_1per-glucose_Rep4_ATH1 | 7780284 | Ljung_580-8_22_15h_1per-glucose_Rep4_ATH1.CEL | |||
| Ljung_580-9_14_15h_5per-glucose_Rep1_ATH1 | 7780285 | Ljung_580-9_14_15h_5per-glucose_Rep1_ATH1.CEL |