NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Experiment:571
Title:L.C EXP1/K.L EXP2
Date:2012-05-23
Description:Experiment 1Investigator: L. CivaleThe aim is to characterise and compare the gene expression profiles of Arabidopsis roots of mature plants treated to hypoxic stress (Sparged with 3% O2 Gas) grown in hydroponic culture, in wild-type (Col-0) and nia1 T-DNA insertion mutant line plants(SALK_148487C). NIA1 is the minor isoform of nitrate reductase in Arabidopsis.Experiment 2Investigator: K. LewandowskiThe aim is to characterise and compare the gene expression profiles of leaf and meristem tissue taken from wild-type (Col-0) Arabidopsis plants and a transgenic line overexpressing a potential novel miRNA, just before the transition to reproductive growth.
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
Civale_571-10_Hypoxia-24hrs-nia1_Rep1_ATH17780152 Civale_571-10_Hypoxia-24hrs-nia1_Rep1_ATH1.CEL
Civale_571-11_Hypoxia-24hrs-nia1_Rep2_ATH17780153 Civale_571-11_Hypoxia-24hrs-nia1_Rep2_ATH1.CEL
Civale_571-12_Hypoxia-24hrs-nia1_Rep3_ATH17780154 Civale_571-12_Hypoxia-24hrs-nia1_Rep3_ATH1.CEL
Civale_571-13_Leaf-40-days_1239_Rep1_ATH17780155 Civale_571-13_Leaf-40-days_1239_Rep1_ATH1.CEL
Civale_571-14_Leaf-40-days_1239_Rep2_ATH17780156 Civale_571-14_Leaf-40-days_1239_Rep2_ATH1.CEL
Civale_571-15_Leaf-40-days_1239_Rep3_ATH17780157 Civale_571-15_Leaf-40-days_1239_Rep3_ATH1.CEL
Civale_571-16_Mersitem-40-days_1239_Rep1_ATH17780158 Civale_571-16_Mersitem-40-days_1239_Rep1_ATH1.CEL
Civale_571-17_Mersitem-40-days_1239_Rep2_ATH17780159 Civale_571-17_Mersitem-40-days_1239_Rep2_ATH1.CEL
Civale_571-18_Mersitem-40-days_1239_Rep3_ATH17780160 Civale_571-18_Mersitem-40-days_1239_Rep3_ATH1.CEL
Civale_571-19_Leaf-40-days_Col-0_Rep1_ATH17780161 Civale_571-19_Leaf-40-days_Col-0_Rep1_ATH1.CEL
Civale_571-1_Normoxia-24hrs-Col-0_Rep1_ATH17780143 Civale_571-1_Normoxia-24hrs-Col-0_Rep1_ATH1.CEL
Civale_571-20_Leaf-40-days_Col-0_Rep2_ATH17780162 Civale_571-20_Leaf-40-days_Col-0_Rep2_ATH1.CEL
Civale_571-21_Leaf-40-days_Col-0_Rep3_ATH17780163 Civale_571-21_Leaf-40-days_Col-0_Rep3_ATH1.CEL
Civale_571-22_Mersitem-40-days_Col-0_Rep1_ATH17780164 Civale_571-22_Mersitem-40-days_Col-0_Rep1_ATH1.CEL
Civale_571-23_Mersitem-40-days_Col-0_Rep2_ATH17780165 Civale_571-23_Mersitem-40-days_Col-0_Rep2_ATH1.CEL
Civale_571-24_Mersitem-40-days_Col-0_Rep3_ATH17780166 Civale_571-24_Mersitem-40-days_Col-0_Rep3_ATH1.CEL
Civale_571-2_Normoxia-24hrs-Col-0_Rep2_ATH17780144 Civale_571-2_Normoxia-24hrs-Col-0_Rep2_ATH1.CEL
Civale_571-3_Normoxia-24hrs-Col-0_Rep3_ATH17780145 Civale_571-3_Normoxia-24hrs-Col-0_Rep3_ATH1.CEL
Civale_571-4_Hypoxia-24hrs-Col-0_Rep1_ATH17780146 Civale_571-4_Hypoxia-24hrs-Col-0_Rep1_ATH1.CEL
Civale_571-5_Hypoxia-24hrs-Col-0_Rep2_ATH17780147 Civale_571-5_Hypoxia-24hrs-Col-0_Rep2_ATH1.CEL
Civale_571-6_Hypoxia-24hrs-Col-0_Rep3_ATH17780148 Civale_571-6_Hypoxia-24hrs-Col-0_Rep3_ATH1.CEL
Civale_571-7_Normoxia-24hrs-nia1_Rep1_ATH17780149 Civale_571-7_Normoxia-24hrs-nia1_Rep1_ATH1.CEL
Civale_571-8_Normoxia-24hrs-nia1_Rep2_ATH17780150 Civale_571-8_Normoxia-24hrs-nia1_Rep2_ATH1.CEL
Civale_571-9_Normoxia-24hrs-nia1_Rep3_ATH17780151 Civale_571-9_Normoxia-24hrs-nia1_Rep3_ATH1.CEL