NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Experiment:566
Title:Comparison of silenced type II NAD(P)H dehydrogenase genes
Date:2012-10-23
Description:Type II NAD(P)H dehydrogenases bypass the energy-conserving steps in the plant mitochondrial electron transport chain. In this investigation we suppressed NDA1 and NDA2 with one RNAi construct, and separately, NDB1 with another construct. Both NDA1,2- and NDB1-suppressing plants displayed lowered level of transcript for the respective target genes. Also, the plants of both lines showed a small but significant decrease in biomass accumulation, as compared to the wild type. To investigate the putative transcriptomic effects of the gene silencing we grew plant in 10 h light period and harvested rosettes briefly before flowering for transcript analyses.
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
Rasmusson_566-10_ndb1-8.7_Rep1_ATH17780086 Rasmusson_566-10_ndb1-8.7_Rep1_ATH1.CEL
Rasmusson_566-11_ndb1-8.7_Rep2_ATH17780087 Rasmusson_566-11_ndb1-8.7_Rep2_ATH1.CEL
Rasmusson_566-12_ndb1-8.7_Rep4_ATH17780088 Rasmusson_566-12_ndb1-8.7_Rep4_ATH1.CEL
Rasmusson_566-13_ndb1-1.5_Rep1_ATH17780089 Rasmusson_566-13_ndb1-1.5_Rep1_ATH1.CEL
Rasmusson_566-14_ndb1-1.5_Rep2_ATH17780090 Rasmusson_566-14_ndb1-1.5_Rep2_ATH1.CEL
Rasmusson_566-15_ndb1-1.5_Rep4_ATH17780091 Rasmusson_566-15_ndb1-1.5_Rep4_ATH1.CEL
Rasmusson_566-1_WT_Rep1_ATH17780077Whole rosette Rasmusson_566-1_WT_Rep1_ATH1.CEL
Rasmusson_566-2_WT_Rep2_ATH17780078Whole rosette Rasmusson_566-2_WT_Rep2_ATH1.CEL
Rasmusson_566-3_WT_Rep4_ATH17780079Whole rosette Rasmusson_566-3_WT_Rep4_ATH1.CEL
Rasmusson_566-4_nda-17.11_Rep1_ATH17780080 Rasmusson_566-4_nda-17.11_Rep1_ATH1.CEL
Rasmusson_566-5_nda-17.11_Rep2_ATH17780081 Rasmusson_566-5_nda-17.11_Rep2_ATH1.CEL
Rasmusson_566-6_nda-17.11_Rep4_ATH17780082 Rasmusson_566-6_nda-17.11_Rep4_ATH1.CEL
Rasmusson_566-7_nda-26.6_Rep1_ATH17780083 Rasmusson_566-7_nda-26.6_Rep1_ATH1.CEL
Rasmusson_566-8_nda-26.6_Rep2_ATH17780084 Rasmusson_566-8_nda-26.6_Rep2_ATH1.CEL
Rasmusson_566-9_nda-26.6_Rep4_ATH17780085 Rasmusson_566-9_nda-26.6_Rep4_ATH1.CEL