NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Experiment:538
Title:Temperature stress on nrpd2A and rts1-1 mutants
Date:2011-10-12
Description:The role of NRPD2A and RTS1 on transcriptional regulation induced by heat stress.
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
Jonak_538-10_nrpd2A_Recovery_Rep1_ATH17779700Col-0 (Columbia, N60000)leaf rosette N595689Jonak_538-10_nrpd2A_Recovery_Rep1_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 16 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-11_DT_Recovery_Rep1_ATH17779701Col-0leaf rosette Jonak_538-11_DT_Recovery_Rep1_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 24 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-12_rts1-1_Recovery_Rep1_ATH17779702Col-0leaf rosette Jonak_538-12_rts1-1_Recovery_Rep1_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 24 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-13_Col-0_Control_Rep2_ATH17779703leaf rosette Jonak_538-13_Col-0_Control_Rep2_ATH1.CEL
Jonak_538-14_nrpd2A_Control_Rep2_ATH17779704Col-0 (Columbia, N60000)leaf rosette N595689Jonak_538-14_nrpd2A_Control_Rep2_ATH1.CEL
Jonak_538-15_DT_Control_Rep2_ATH17779705Col-0leaf rosette Jonak_538-15_DT_Control_Rep2_ATH1.CEL
Jonak_538-16_rts1-1_Control_Rep2_ATH17779706Col-0leaf rosette Jonak_538-16_rts1-1_Control_Rep2_ATH1.CEL
Jonak_538-17_Col-0_Stress_Rep2_ATH17779707leaf rosette Jonak_538-17_Col-0_Stress_Rep2_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 16 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-18_nrpd2A_Stress_Rep2_ATH17779708Col-0 (Columbia, N60000)leaf rosette N595689Jonak_538-18_nrpd2A_Stress_Rep2_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 16 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-19_DT_Stress_Rep2_ATH17779709Col-0leaf rosette Jonak_538-19_DT_Stress_Rep2_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 24 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-1_Col-0_Control_Rep1_ATH17779691leaf rosette Jonak_538-1_Col-0_Control_Rep1_ATH1.CEL
Jonak_538-20_rts1-1_Stress_Rep2_ATH17779710Col-0leaf rosette Jonak_538-20_rts1-1_Stress_Rep2_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 24 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-21_Col-0_Recovery_Rep2_ATH17779711leaf rosette Jonak_538-21_Col-0_Recovery_Rep2_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 16 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-22_nrpd2A_Recovery_Rep2_ATH17779712Col-0 (Columbia, N60000)leaf rosette N595689Jonak_538-22_nrpd2A_Recovery_Rep2_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 16 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-23_DT_Recovery_Rep2_ATH17779713Col-0leaf rosette Jonak_538-23_DT_Recovery_Rep2_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 24 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-24_rts1-1_Recovery_Rep2_ATH17779714Col-0leaf rosette Jonak_538-24_rts1-1_Recovery_Rep2_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 24 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-25_Col-0_Control_Rep3_ATH17779715leaf rosette Jonak_538-25_Col-0_Control_Rep3_ATH1.CEL
Jonak_538-26_nrpd2A_Control_Rep3_ATH17779716Col-0 (Columbia, N60000)leaf rosette N595689Jonak_538-26_nrpd2A_Control_Rep3_ATH1.CEL
Jonak_538-27_DT_Control_Rep3_ATH17779717Col-0leaf rosette Jonak_538-27_DT_Control_Rep3_ATH1.CEL
Jonak_538-28_rts1-1_Control_Rep3_ATH17779718Col-0leaf rosette Jonak_538-28_rts1-1_Control_Rep3_ATH1.CEL
Jonak_538-29_Col-0_Stress_Rep3_ATH17779719leaf rosette Jonak_538-29_Col-0_Stress_Rep3_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 16 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-2_nrpd2A_Control_Rep1_ATH17779692Col-0 (Columbia, N60000)leaf rosette N595689Jonak_538-2_nrpd2A_Control_Rep1_ATH1.CEL
Jonak_538-30_nrpd2A_Stress_Rep3_ATH17779720Col-0 (Columbia, N60000)leaf rosette N595689Jonak_538-30_nrpd2A_Stress_Rep3_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 16 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-31_DT_Stress_Rep3_ATH17779721Col-0leaf rosette Jonak_538-31_DT_Stress_Rep3_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 24 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-32_rts1-1_Stress_Rep3_ATH17779722Col-0leaf rosette Jonak_538-32_rts1-1_Stress_Rep3_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 24 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-33_Col-0_Recovery_Rep3_ATH17779723leaf rosette Jonak_538-33_Col-0_Recovery_Rep3_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 16 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-34_nrpd2A_Recovery_Rep3_ATH17779724Col-0 (Columbia, N60000)leaf rosette N595689Jonak_538-34_nrpd2A_Recovery_Rep3_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 16 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-35_DT_Recovery_Rep3_ATH17779725Col-0leaf rosette Jonak_538-35_DT_Recovery_Rep3_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 24 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-36_rts1-1_Recovery_Rep3_ATH17779726Col-0leaf rosette Jonak_538-36_rts1-1_Recovery_Rep3_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 24 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-3_DT_Control_Rep1_ATH17779693Col-0leaf rosette Jonak_538-3_DT_Control_Rep1_ATH1.CEL
Jonak_538-4_rts1-1_Control_Rep1_ATH17779694Col-0leaf rosette Jonak_538-4_rts1-1_Control_Rep1_ATH1.CEL
Jonak_538-5_Col-0_Stress_Rep1_ATH17779695leaf rosette Jonak_538-5_Col-0_Stress_Rep1_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 24 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-6_nrpd2A_Stress_Rep1_ATH17779696Col-0 (Columbia, N60000)leaf rosette N595689Jonak_538-6_nrpd2A_Stress_Rep1_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 16 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-7_DT_Stress_Rep1_ATH17779697Col-0leaf rosette Jonak_538-7_DT_Stress_Rep1_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 24 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-8_rts1-1_Stress_Rep1_ATH17779698Col-0leaf rosette Jonak_538-8_rts1-1_Stress_Rep1_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 24 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.
Jonak_538-9_Col-0_Recovery_Rep1_ATH17779699leaf rosette Jonak_538-9_Col-0_Recovery_Rep1_ATH1.CEL
Treatment: Heat stress was administered in a PERCIVAL CU-36/L4 (USA). 4 week-old plants were transferred for 16 h to 42°C (day/night temperature, LD conditions and 70% light intensity). After stress treatments, 20 plants were pooled and frozen in liquid nitrogen for RNA extraction and the rest were returned to the growth chamber for recovery. After 2 days of recovery 20 plants were harvested in parallel with control plants. To reduce the circadian effect all samples were harvested at the same time.