NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Experiment:	503
Title:	Auxin induced in-vitro cambium initiation in Atrabidopsis thaliana
Date:	2009-03-17
Description:	An in-vitro system has been used to induce Cambium initiation in Arabidopsis thaliana stems via Auxin treatments. A time course experiment has been performed and LCM harvested samples from different tissue types have been hybridized. The aim of the project is to isolate and characterize important regulators for cambium initiation.
ftp Link:	ftp Link

Slide Information:

Slide ID	Slide Name	Tissue	Cel File
Agusti_0dC1_SLD	7779158	Stem except starch sheath layer and vascular bundles.	Agusti_1-4_0dC1_Rep1_ATH1.CEL
Agusti_0dC1_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were rapidly embedded in OCT and frozen until used.
Agusti_0dC2_SLD	7779159	Stem except starch sheath layer and vascular bundles.	Agusti_1-5_0dC2_Rep2_ATH1.CEL
Agusti_0dC2_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were rapidly embedded in OCT and frozen until used.
Agusti_0dC3_SLD	7779160	Stem except starch sheath layer and vascular bundles.	Agusti_1-6_0dC3_Rep3_ATH1.CEL
Agusti_0dC3_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were rapidly embedded in OCT and frozen until used.
Agusti_0dSS1_SLD	7779155	Stem starch sheath layer + interfascicular fibers	Agusti_1-1_0dSS1_Rep1_ATH1.CEL
Agusti_0dSS1_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were rapidly embedded in OCT and frozen until used.
Agusti_0dSS2_SLD	7779156	Stem starch sheath layer + interfascicular fibers	Agusti_1-2_0dSS2_Rep2_ATH1.CEL
Agusti_0dSS2_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were rapidly embedded in OCT and frozen until used.
Agusti_0dSS3_SLD	7779157	Stem starch sheath layer + interfascicular fibers	Agusti_1-3_0dSS3_Rep3_ATH1.CEL
Agusti_0dSS3_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were rapidly embedded in OCT and frozen until used.
Agusti_2dMS_SS1_SLD	7779167	Starch sheath + interfascicular fibers	Agusti_1-13_2dMS-SS1_Rep1_ATH1_3.CEL
Agusti_2dMS_SS1_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_2dMS_SS2_SLD	7779168	Starch sheath + interfascicular fibers	Agusti_1-14_2dMS-SS2_Rep2_ATH1.CEL
Agusti_2dMS_SS2_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_2dMS_SS3_SLD	7779169	Starch sheath + interfascicular fibers	Agusti_1-15_2dMS-SS3_Rep3_ATH1.CEL
Agusti_2dMS_SS3_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_2dNAA_C1_SLD	7779164	Stem except stach sheath layer and vascular bundles.	Agusti_1-10_2dNAA-C1_Rep1_ATH1_2.CEL
Agusti_2dNAA_C1_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated with NAA in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_2dNAA_C2_SLD	7779165	Stem except stach sheath layer and vascular bundles.	Agusti_1-11_2dNAA-C2_Rep2_ATH1.CEL
Agusti_2dNAA_C2_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated with NAA in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_2dNAA_C3_SLD	7779166	Stem except stach sheath layer and vascular bundles.	Agusti_1-12_2dNAA-C3_Rep3_ATH1.CEL
Agusti_2dNAA_C3_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated with NAA in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_2dNAA_SS1_SLD	7779161	Stem starch sheath + interfascicular fibers.	Agusti_1-7_2dNAA-SS1_Rep1_ATH1.CEL
Agusti_2dNAA_SS1_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated with NAA in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_2dNAA_SS2_SLD	7779162	Stem starch sheath + interfascicular fibers.	Agusti_1-8_2dNAA-SS2_Rep2_ATH1.CEL
Agusti_2dNAA_SS2_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated with NAA in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_2dNAA_SS3_SLD	7779163	Stem starch sheath + interfascicular fibers.	Agusti_1-9_2dNAA-SS3_Rep3_ATH1.CEL
Agusti_2dNAA_SS3_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated with NAA in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_5dMS_SS1_SLD	7779176	Starch sheath + interfascicular fibers	Agusti_1-22_5dMS-SS1_Rep1_ATH1.CEL
Agusti_5dMS_SS1_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_5dMS_SS2_SLD	7779177	Starch sheath + interfascicular fibers	Agusti_1-23_5dMS-SS2_Rep2_ATH1.CEL
Agusti_5dMS_SS2_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_5dMS_SS3_SLD	7779178	Starch sheath + interfascicular fibers	Agusti_1-24_5dMS-SS3_Rep3_ATH1.CEL
Agusti_5dMS_SS3_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_5dNAA_C1_SLD	7779173	Stem except stach sheath layer and vascular bundles.	Agusti_1-19_5dNAA-C1_Rep1_ATH1.CEL
Agusti_5dNAA_C1_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated with NAA in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_5dNAA_C2_SLD	7779174	Stem except stach sheath layer and vascular bundles.	Agusti_1-20_5dNAA-C2_Rep2_ATH1.CEL
Agusti_5dNAA_C2_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated with NAA in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_5dNAA_C3_SLD	7779175	Stem except stach sheath layer and vascular bundles.	Agusti_1-21_5dNAA-C3_Rep3_ATH1.CEL
Agusti_5dNAA_C3_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated with NAA in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_5dNAA_CAM1_SLD	7779170	Starch sheath + interfascicular fibers	Agusti_1-16_5dNAA-CAM1_Rep1_ATH1.CEL
Agusti_5dNAA_CAM1_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated with NAA in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_5dNAA_CAM2_SLD	7779171	Starch sheath + interfascicular fibers	Agusti_1-17_5dNAA-CAM2_Rep2_ATH1.CEL
Agusti_5dNAA_CAM2_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated with NAA in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.
Agusti_5dNAA_CAM3_SLD	7779172	Starch sheath + interfascicular fibers	Agusti_1-18_5dNAA-CAM3_Rep3_ATH1.CEL
Agusti_5dNAA_CAM3_SLD	Treatment: Stems from 15cm plants were harvested. Only plants which first internode was at least 5cm long were selected. Stems were surface sterylised and a 1.5cm sample located 2cm away from the rosette was separated for our experiments. The samples were then incubated with NAA in a MS split-plate. The samples were then rapidly embedded in OCT and frozen until used.