NASCArrays Information at The BAR
NASCArrays Information at The BAR
Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed
from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the
experiment number. To download the CEL files, please click on the ftp link.
| Experiment: | 502 |
| Title: | Cell type specific analysis of root epidermis |
| Date: | 2012-02-15 |
| Description: | The experiment aims to analyse auxin signalling in root epidermis. We used two GFP marker lines (pCOBL9:GFP, pGL2:GFP) and fluorescent activated cell sorting to generate samples of trichoblast and atrichobast cells. Before protoplasting the roots were either mock treated or exposed to IAA (10µM) for 2 hours. Eventually the study will establish the topology of the auxin response system in these cell types and together with data from other sources will enable us to develop a model of auxin signalling in root epidermis. These samples represent a scaled down experiment aimed at testing the efficiency of our experimental protocol from cell sorting to microarray analysis. |
| ftp Link: | ftp Link |
| Slide ID | Slide Name | Genetic Background | Tissue | Stock Code | Cel File |
|---|---|---|---|---|---|
| Kieffer_1-1_Atricoblast-mock_Rep1_ATH1 | 7779148 | Col-0 | root tips | Kieffer_1-1_Atricoblast-mock_Rep1_ATH1.CEL | |
| Kieffer_1-2_Atricoblast-mock_Rep2_ATH1 | 7779149 | Col-0 | root tips | Kieffer_1-2_Atricoblast-mock_Rep2_ATH1.CEL | |
| Kieffer_1-3_Atricoblast-auxin_Rep1_ATH1 | 7779150 | Col-0 | root tips | Kieffer_1-3_Atricoblast-auxin_Rep1_ATH1.CEL | |
| Treatment: IAA 1OµM for 2hrs | |||||
| Kieffer_1-4_Atricoblast-auxin_Rep2_ATH1 | 7779151 | Col-0 | root tips | Kieffer_1-4_Atricoblast-auxin_Rep2_ATH1.CEL | |
| Treatment: IAA 1OµM for 2hrs | |||||
| Kieffer_1-5_Trichoblast-mock_Rep1_ATH1 | 7779152 | Col-0 | root tips | Kieffer_1-5_Trichoblast-mock_Rep1_ATH1.CEL | |
| Kieffer_1-6_Trichoblast-mock_Rep2_ATH1 | 7779153 | Col-0 | root tips | Kieffer_1-6_Trichoblast-mock_Rep2_ATH1.CEL | |
| Kieffer_1-7_Trichoblast-auxin_Rep1_ATH1 | 7779154 | Col-0 | root tips | Kieffer_1-7_Trichoblast-auxin_Rep1_ATH1.CEL | |
| Treatment: IAA 1OµM for 2hrs | |||||