NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Experiment:	494
Title:	Fenclorim safening of Arabidopsis
Date:	2011-05-05
Description:	Wildtype arabidopsis thaliana Col-0 root cultures, were treated with fenclorim or 4-chloro-6-methyl-2-phenylpyrimidine dissolved in acetone to achieve a final concentration of 100uM. The final acetone concentration of 0.1% was replicated in control root cultures. Samples were taken at four and twenty-four hours post addition in biological triplicate. Root cultures were routinely maintained at 25oC in the dark.
ftp Link:	ftp Link

Slide Information:

Slide ID	Slide Name	Tissue	Cel File
Skipsey_1-10_Fenclorim_24hr_Rep1_ATH1	7779054	root	Skipsey_1-10_Fenclorim_24hr_Rep1_ATH1.CEL
Skipsey_1-10_Fenclorim_24hr_Rep1_ATH1	Treatment: The three treatments employed in this study were addition of acetone as a control treatment as this solvent carrier was used to dissolve the compounds in the other treatments. Secondly the safener compound fenclorim was added to cultures. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-11_Fenclorim_24hr_Rep2_ATH1	7779055	root	Skipsey_1-11_Fenclorim_24hr_Rep2_ATH1.CEL
Skipsey_1-11_Fenclorim_24hr_Rep2_ATH1	Treatment: The three treatments employed in this study were addition of acetone as a control treatment as this solvent carrier was used to dissolve the compounds in the other treatments. Secondly the safener compound fenclorim was added to cultures. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-12_Fenclorim_24hr_Rep3_ATH1	7779056	root	Skipsey_1-12_Fenclorim_24hr_Rep3_ATH1.CEL
Skipsey_1-12_Fenclorim_24hr_Rep3_ATH1	Treatment: The three treatments employed in this study were addition of acetone as a control treatment as this solvent carrier was used to dissolve the compounds in the other treatments. Secondly the safener compound fenclorim was added to cultures. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-13_CMP_4hr_Rep1_ATH1	7779057	root	Skipsey_1-13_CMP_4hr_Rep1_ATH1.CEL
Skipsey_1-13_CMP_4hr_Rep1_ATH1	Treatment: The three treatments employed in this study were addition of acetone as a control treatment as this solvent carrier was used to dissolve the compounds in the other treatments. Finally 4-chloro-6-methyl-2-phenylpyrimidine (CMP) was added to cultures. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-14_CMP_4hr_Rep2_ATH1	7779058	root	Skipsey_1-14_CMP_4hr_Rep2_ATH1.CEL
Skipsey_1-14_CMP_4hr_Rep2_ATH1	Treatment: The three treatments employed in this study were addition of acetone as a control treatment as this solvent carrier was used to dissolve the compounds in the other treatments. Finally 4-chloro-6-methyl-2-phenylpyrimidine (CMP) was added to cultures. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-15_CMP_4hr_Rep3_ATH1	7779059	root	Skipsey_1-15_CMP_4hr_Rep3_ATH1.CEL
Skipsey_1-15_CMP_4hr_Rep3_ATH1	Treatment: The three treatments employed in this study were addition of acetone as a control treatment as this solvent carrier was used to dissolve the compounds in the other treatments. Finally 4-chloro-6-methyl-2-phenylpyrimidine (CMP) was added to cultures. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-16_CMP_24hr_Rep1_ATH1	7779060	root	Skipsey_1-16_CMP_24hr_Rep1_ATH1.CEL
Skipsey_1-16_CMP_24hr_Rep1_ATH1	Treatment: The three treatments employed in this study were addition of acetone as a control treatment as this solvent carrier was used to dissolve the compounds in the other treatments. Finally 4-chloro-6-methyl-2-phenylpyrimidine (CMP) was added to cultures. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-17_CMP_24hr_Rep2_ATH1	7779061	root	Skipsey_1-17_CMP_24hr_Rep2_ATH1.CEL
Skipsey_1-17_CMP_24hr_Rep2_ATH1	Treatment: The three treatments employed in this study were addition of acetone as a control treatment as this solvent carrier was used to dissolve the compounds in the other treatments. Finally 4-chloro-6-methyl-2-phenylpyrimidine (CMP) was added to cultures. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-18_CMP_24hr_Rep3_ATH1	7779062	root	Skipsey_1-18_CMP_24hr_Rep3_ATH1.CEL
Skipsey_1-18_CMP_24hr_Rep3_ATH1	Treatment: The three treatments employed in this study were addition of acetone as a control treatment as this solvent carrier was used to dissolve the compounds in the other treatments. Finally 4-chloro-6-methyl-2-phenylpyrimidine (CMP) was added to cultures. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-1_Acetone_4hr_Rep1_ATH1	7779045	root	Skipsey_1-1_Acetone_4hr_Rep1_ATH1.CEL
Skipsey_1-1_Acetone_4hr_Rep1_ATH1	Treatment: The inducing chemical treatments were prepared as 100 mM stocks in acetone and added to the medium as a 1:1000 dilution. Control treatments consisted of 0.1% v/v acetone. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-2_Acetone_4hr_Rep2_ATH1	7779046	root	Skipsey_1-2_Acetone_4hr_Rep2_ATH1.CEL
Skipsey_1-2_Acetone_4hr_Rep2_ATH1	Treatment: The inducing chemical treatments were prepared as 100 mM stocks in acetone and added to the medium as a 1:1000 dilution. Control treatments consisted of 0.1% v/v acetone. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-3_Acetone_4hr_Rep3_ATH1	7779047	root	Skipsey_1-3_Acetone_4hr_Rep3_ATH1.CEL
Skipsey_1-3_Acetone_4hr_Rep3_ATH1	Treatment: The inducing chemical treatments were prepared as 100 mM stocks in acetone and added to the medium as a 1:1000 dilution. Control treatments consisted of 0.1% v/v acetone. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-4_Acetone_24hr_Rep1_ATH1	7779048	root	Skipsey_1-4_Acetone_24hr_Rep1_ATH1.CEL
Skipsey_1-4_Acetone_24hr_Rep1_ATH1	Treatment: The inducing chemical treatments were prepared as 100 mM stocks in acetone and added to the medium as a 1:1000 dilution. Control treatments consisted of 0.1% v/v acetone. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-5_Acetone_24hr_Rep2_ATH1	7779049	root	Skipsey_1-5_Acetone_24hr_Rep2_ATH1.CEL
Skipsey_1-5_Acetone_24hr_Rep2_ATH1	Treatment: The inducing chemical treatments were prepared as 100 mM stocks in acetone and added to the medium as a 1:1000 dilution. Control treatments consisted of 0.1% v/v acetone. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-6_Acetone_24hr_Rep3_ATH1	7779050	root	Skipsey_1-6_Acetone_24hr_Rep3_ATH1.CEL
Skipsey_1-6_Acetone_24hr_Rep3_ATH1	Treatment: The inducing chemical treatments were prepared as 100 mM stocks in acetone and added to the medium as a 1:1000 dilution. Control treatments consisted of 0.1% v/v acetone. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-7_Fenclorim_4hr_Rep1_ATH1	7779051	root	Skipsey_1-7_Fenclorim_4hr_Rep1_ATH1.CEL
Skipsey_1-7_Fenclorim_4hr_Rep1_ATH1	Treatment: The three treatments employed in this study were addition of acetone as a control treatment as this solvent carrier was used to dissolve the compounds in the other treatments. Secondly the safener compound fenclorim was added to cultures. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-8_Fenclorim_4hr_Rep2_ATH1	7779052	root	Skipsey_1-8_Fenclorim_4hr_Rep2_ATH1.CEL
Skipsey_1-8_Fenclorim_4hr_Rep2_ATH1	Treatment: The three treatments employed in this study were addition of acetone as a control treatment as this solvent carrier was used to dissolve the compounds in the other treatments. Secondly the safener compound fenclorim was added to cultures. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.
Skipsey_1-9_Fenclorim_4hr_Rep3_ATH1	7779053	root	Skipsey_1-9_Fenclorim_4hr_Rep3_ATH1.CEL
Skipsey_1-9_Fenclorim_4hr_Rep3_ATH1	Treatment: The three treatments employed in this study were addition of acetone as a control treatment as this solvent carrier was used to dissolve the compounds in the other treatments. Secondly the safener compound fenclorim was added to cultures. Treatment compounds were added to Arabidopsis root cultures for 4 h and 24 h periods prior to RNA extraction.