NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Experiment:483
Title:Biological function of Pip3
Date:2009-11-25
Description:Ralstonia solanacearum is the causal agent of bacterial wilt. Arabidopsis thaliana monogenic resistance to the strain GMI1000 is conferred by the RRS1-R gene, present in Nd-1 resistant ecotype and absent in the susceptible ecotype Col-0. The corresponding protein is recognized by the avirulence protein PopP2 of R. solanacearum. In order to identify the plant proteins involved in the PopP2/RRS1-R perception complex, the screening of a root cDNA library in yeast was performed using PopP2 as bait. One interactor found was called Pip3, and we would like understanding better its biological function. Thereby we choose to compare two RNAi lines with their wild type Nd-1 background, and one KO line with its wilt type Col-0 background. Also, two overexpressor lines will be compared with their wilt type Nd-1 background and two with their Col-0 background.
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
Marco_3-10_Col-0-2_Rep2_ATH17778829whole plant Marco_3-10_Col-0-2_Rep2_ATH1.CEL
Marco_3-11_Nd-1-2_Rep2_ATH17778830whole plant Marco_3-11_Nd-1-2_Rep2_ATH1.CEL
Marco_3-12_Pip3-3HA-1-2_Rep2_ATH17778831Col-0whole plant Marco_3-12_Pip3-3HA-1-2_Rep2_ATH1.CEL
Marco_3-13_Pip3-3HA-9-2_Rep2_ATH17778832Col-0whole plant Marco_3-13_Pip3-3HA-9-2_Rep2_ATH1.CEL
Marco_3-14_Pip3-3HA6H-1-2_Rep2_ATH17778833whole plant Marco_3-14_Pip3-3HA6H-1-2_Rep2_ATH1.CEL
Marco_3-15_Pip3-3HA6H-5-2_Rep2_ATH17778834whole plant Marco_3-15_Pip3-3HA6H-5-2_Rep2_ATH1.CEL
Marco_3-16_pGli-69-31-2_Rep2_ATH17778835whole plant Marco_3-16_pGli-69-31-2_Rep2_ATH1.CEL
Marco_3-17_pGli-69-24-2_Rep2_ATH17778836whole plant Marco_3-17_pGli-69-24-2_Rep2_ATH1.CEL
Marco_3-18_KO-Pip3-2_Rep2_ATH17778837whole plant N831762Marco_3-18_KO-Pip3-2_Rep2_ATH1.CEL
Marco_3-19_Col-0-3_Rep3_ATH17778838whole plant Marco_3-19_Col-0-3_Rep3_ATH1.CEL
Marco_3-1_Col-0_Rep1_ATH17778820whole plant Marco_3-1_Col-0_Rep1_ATH1.CEL
Marco_3-20_Nd-1-3_Rep3_ATH17778839whole plant Marco_3-20_Nd-1-3_Rep3_ATH1.CEL
Marco_3-21_Pip3-3HA-1-3_Rep3_ATH17778840Col-0whole plant Marco_3-21_Pip3-3HA-1-3_Rep3_ATH1.CEL
Marco_3-22_Pip3-3HA-9-3_Rep3_ATH17778841Col-0whole plant Marco_3-22_Pip3-3HA-9-3_Rep3_ATH1.CEL
Marco_3-23_Pip3-3HA6H-1-3_Rep3_ATH17778842whole plant Marco_3-23_Pip3-3HA6H-1-3_Rep3_ATH1.CEL
Marco_3-24_Pip3-3HA6H-5-3_Rep3_ATH17778843whole plant Marco_3-24_Pip3-3HA6H-5-3_Rep3_ATH1.CEL
Marco_3-25_pGli-69-31-3_Rep3_ATH17778844whole plant Marco_3-25_pGli-69-31-3_Rep3_ATH1.CEL
Marco_3-26_pGli-69-24-3_Rep3_ATH17778845whole plant Marco_3-26_pGli-69-24-3_Rep3_ATH1.CEL
Marco_3-27_KO-Pip3-3_Rep3_ATH17778846whole plant N831762Marco_3-27_KO-Pip3-3_Rep3_ATH1.CEL
Marco_3-2_Nd-1_Rep1_ATH17778821whole plant Marco_3-2_Nd-1_Rep1_ATH1.CEL
Marco_3-3_Pip3-3HA-1_Rep1_ATH17778822Col-0whole plant Marco_3-3_Pip3-3HA-1_Rep1_ATH1.CEL
Marco_3-4_Pip3-3HA-9_Rep1_ATH1_27778823Col-0whole plant Marco_3-4_Pip3-3HA-9_Rep1_ATH1_2.CEL
Marco_3-5_Pip3-3HA6H-1_Rep1_ATH17778824whole plant Marco_3-5_Pip3-3HA6H-1_Rep1_ATH1.CEL
Marco_3-6_Pip3-3HA6H-5_Rep1_ATH17778825whole plant Marco_3-6_Pip3-3HA6H-5_Rep1_ATH1.CEL
Marco_3-7_pGli-69-31_Rep1_ATH1_27778826whole plant Marco_3-7_pGli-69-31_Rep1_ATH1_2.CEL
Marco_3-8_pGli-69-24_Rep1_ATH17778827whole plant Marco_3-8_pGli-69-24_Rep1_ATH1.CEL
Marco_3-9_KO-Pip3_Rep1_ATH17778828whole plant N831762Marco_3-9_KO-Pip3_Rep1_ATH1.CEL