NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Title:Transcriptome of Arabidopsis APS kinase null mutants
Description:The aim of the experiment is to look at transcriptional changes in null mutants of APS kinase. There are four APS kinase isoforms in Arabidopsis, we are interested in the double mutant APK1/APK2, created by crossing two single salk lines. The transcriptomes of WT (Col-0) plants and the double knockout (ab) will be compared. The plants were grown under controlled environment conditions of 10h day, 14h night, 22 degrees centigrade, 60% humidity for five weeks. 10 whole rosettes were pooled for each replicate, there are three replicates for each genotype.
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
Mugford_1-1_Col0-control_Rep1_ATH121506whole rosette N1092Mugford_1-1_Col0-control_Rep1_ATH1.CEL
Mugford_1-2_Col0-control_Rep2_ATH121507whole rosette N1092Mugford_1-2_Col0-control_Rep2_ATH1.CEL
Mugford_1-3_Col0-control_Rep3_ATH121508whole rosette N1092Mugford_1-3_Col0-control_Rep3_ATH1.CEL
Mugford_1-4_ab-double-knockout_Rep1_ATH121509whole rosette N55347 crossed with N593072Mugford_1-4_ab-double-knockout_Rep1_ATH1.CEL
Mugford_1-5_ab-double-knockout_Rep2_ATH121510whole rosette N55347 crossed with N593072Mugford_1-5_ab-double-knockout_Rep2_ATH1.CEL
Mugford_1-6_ab-double-knockout_Rep3_ATH121511whole rosette N55347 crossed with N593072Mugford_1-6_ab-double-knockout_Rep3_ATH1.CEL