NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Experiment:454
Title:Arabidopsis thaliana mutant leaves treated with Pseudomonas syringae ES4326
Date:2008-04-02
Description:In order to better understand the transcriptional networks triggered by pathogen inoculation, we monitored gene expression in leaves of mutant Arabidopsis plants, inoculated with Pseudomonas syringae ES4326 and wild type Col-0 plants grown in parallel. Individual leaves were injected in the morning using a needle-less syringe with 10E5 cfu cm-2 PsmES4326 (suspended in 5 mM MgSO4). For the wild type, leaves were also mock treated with 5 mM MgSO4. Leaves were harvested 24 hours later. Plants were grown in pots with BM-2 soil (Berger Peat Moss Ltd, Quebec, Canada) at a density of 9 plants per pot and kept at 22 degrees Celsius with 75% humidity and a 12 hour day length.
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
Mitra_2-10_ein2-PsmES4326-24hpi_Rep1_ATH121478Col-0leaf Mitra_2-10_ein2-PsmES4326-24hpi_Rep1_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326.
Mitra_2-11_ein2-PsmES4326-24hpi_Rep2_ATH121479Col-0leaf Mitra_2-11_ein2-PsmES4326-24hpi_Rep2_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326.
Mitra_2-12_ein2-PsmES4326-24hpi_Rep3_ATH121480Col-0leaf Mitra_2-12_ein2-PsmES4326-24hpi_Rep3_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326.
Mitra_2-13_npr1-PsmES4326-24hpi_Rep1_ATH121481Col-0leaf Mitra_2-13_npr1-PsmES4326-24hpi_Rep1_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326.
Mitra_2-14_npr1-PsmES4326-24hpi_Rep2_ATH121482Col-0leaf Mitra_2-14_npr1-PsmES4326-24hpi_Rep2_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326.
Mitra_2-15_npr1-PsmES4326-24hpi_Rep3_ATH121483Col-0leaf Mitra_2-15_npr1-PsmES4326-24hpi_Rep3_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326.
Mitra_2-16_pad2-PsmES4326-24hpi_Rep1_ATH121484Col-0leaf Mitra_2-16_pad2-PsmES4326-24hpi_Rep1_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326.
Mitra_2-17_pad2-PsmES4326-24hpi_Rep2_ATH121485Col-0leaf Mitra_2-17_pad2-PsmES4326-24hpi_Rep2_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326.
Mitra_2-18_pad2-PsmES4326-24hpi_Rep3_ATH121486Col-0leaf Mitra_2-18_pad2-PsmES4326-24hpi_Rep3_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326.
Mitra_2-19_pad4-PsmES4326-24hpi_Rep1_ATH121487Col-0leaf Mitra_2-19_pad4-PsmES4326-24hpi_Rep1_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326.
Mitra_2-1_coi1-PsmES4326-24hpi_Rep1_ATH121469Col-0leaf Mitra_2-1_coi1-PsmES4326-24hpi_Rep1_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326
Mitra_2-20_pad4-PsmES4326-24hpi_Rep2_ATH121488Col-0leaf Mitra_2-20_pad4-PsmES4326-24hpi_Rep2_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326.
Mitra_2-21_pad4-PsmES4326-24hpi_Rep3_ATH121489Col-0leaf Mitra_2-21_pad4-PsmES4326-24hpi_Rep3_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326.
Mitra_2-22_sid2-PsmES4326-24hpi_Rep1_ATH121490Col-0leaf Mitra_2-22_sid2-PsmES4326-24hpi_Rep1_ATH1.CEL
Treatment: Leaves were injected with 10E5 cfui/cm-2 PsmES4326 suspended in 5 mM MgSO4.
Mitra_2-23_sid2-PsmES4326-24hpi_Rep2_ATH121491Col-0leaf Mitra_2-23_sid2-PsmES4326-24hpi_Rep2_ATH1.CEL
Treatment: Leaves were injected with 10E5 cfui/cm-2 PsmES4326 suspended in 5 mM MgSO4.
Mitra_2-24_sid2-PsmES4326-24hpi_Rep3__ATH121492Col-0leaf Mitra_2-24_sid2-PsmES4326-24hpi_Rep3__ATH1.CEL
Treatment: Leaves were injected with 10E5 cfui/cm-2 PsmES4326 suspended in 5 mM MgSO4.
Mitra_2-2_coi1-PsmES4326-24hpi_Rep2_ATH121470Col-0leaf Mitra_2-2_coi1-PsmES4326-24hpi_Rep2_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326
Mitra_2-3_coi1-PsmES4326-24hpi_Rep3_ATH121471Col-0leaf Mitra_2-3_coi1-PsmES4326-24hpi_Rep3_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326
Mitra_2-4_Col0-mock-24hpi_Rep1_ATH121472leaf Mitra_2-4_Col0-mock-24hpi_Rep1_ATH1.CEL
Treatment: Leaves were mock infected with 5 mM MgSO4, leaves collected 24 hours later
Mitra_2-5_Col0-mock-24hpi_Rep2_ATH121473leaf Mitra_2-5_Col0-mock-24hpi_Rep2_ATH1.CEL
Treatment: Leaves were mock infected with 5 mM MgSO4, leaves collected 24 hours later
Mitra_2-6_Col0-mock-24hpi_Rep3_ATH121474leaf Mitra_2-6_Col0-mock-24hpi_Rep3_ATH1.CEL
Treatment: Leaves were mock infected with 5 mM MgSO4, leaves collected 24 hours later
Mitra_2-7_Col0-PsmES4326-24hpi_Rep1_ATH121475leaf Mitra_2-7_Col0-PsmES4326-24hpi_Rep1_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326
Mitra_2-8_Col0-PsmES4326-24hpi_Rep2_ATH121476leaf Mitra_2-8_Col0-PsmES4326-24hpi_Rep2_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326
Mitra_2-9_Col0-PsmES4326-24hpi_Rep3_ATH121477leaf Mitra_2-9_Col0-PsmES4326-24hpi_Rep3_ATH1.CEL
Treatment: Leaves were infected with Pseudomonas syringae pv maculicola ES4326