NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Experiment:409
Title:Oligogalacturonide treatment of Arabidopsis seedlings
Date:2007-01-15
Description:To assess the contribution to defenses against necrotrophic fungal pathogens that may be mediated by recognition of oligogalacturonides (OGs), cell wall fragments released by the activity of fungal polygalacturonases, we treated seedlings with OGs and assayed transcript levels 1 and 6 hours after addition of OGs to culture medium. For each sample, approximately 30 seedlings were grown in shallow liquid MS medium for 10 days. Plants were then treated with either 200 ug/ml OGs or, for control plants, an equal volume of water. Three replicate samples were assayed for each treatment.
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
Dewdney_1-10_H20-3h_Rep1_ATH120806whole plant Dewdney_1-10_H2O-3h_Rep1_ATH1.CEL
Treatment: water was added to the medium on day 10
Dewdney_1-11_H20-3h_Rep2_ATH120807whole plant Dewdney_1-11_H2O-3h_Rep2_ATH1.CEL
Treatment: water was added to the medium on day 10
Dewdney_1-12_H20-3h_Rep3_ATH120808whole plant Dewdney_1-12_H2O-3h_Rep3_ATH1.CEL
Treatment: water was added to the medium on day 10
Dewdney_1-13_OGs-1h_Rep1_ATH120815whole plant Dewdney_1-13_OGs-1h_Rep1_ATH1.CEL
Treatment: 50 ug/ml oligogalacturonides, degree of polymerization 10-15, were added to the medium on day 10.
Dewdney_1-14_OGs-1h_Rep2_ATH120816whole plant Dewdney_1-14_OGs-1h_Rep2_ATH1.CEL
Treatment: 50 ug/ml oligogalacturonides, degree of polymerization 10-15, were added to the medium on day 10.
Dewdney_1-15_OGs-1h_Rep3_ATH120817whole plant Dewdney_1-15_OGs-1h_Rep3_ATH1.CEL
Treatment: 50 ug/ml oligogalacturonides, degree of polymerization 10-15, were added to the medium on day 10.
Dewdney_1-16_OGs-3h_Rep1_ATH120818whole plant Dewdney_1-16_OGs-3h_Rep1_ATH1.CEL
Treatment: 50 ug/ml oligogalacturonides, degree of polymerization 10-15, were added to the medium on day 10.
Dewdney_1-17_OGs-3h_Rep2_ATH120819whole plant Dewdney_1-17_OGs-3h_Rep2_ATH1.CEL
Treatment: 50 ug/ml oligogalacturonides, degree of polymerization 10-15, were added to the medium on day 10.
Dewdney_1-18_OGs-3h_Rep3_ATH120820whole plant Dewdney_1-18_OGs-3h_Rep3_ATH1.CEL
Treatment: 50 ug/ml oligogalacturonides, degree of polymerization 10-15, were added to the medium on day 10.
Dewdney_1-1_Flg22-1h_Rep1_ATH120797whole plant Dewdney_1-1_Flg22-1h_Rep1_ATH1.CEL
Treatment: Flg22, final concentration 1 uM, was added to the medium on day 10.
Dewdney_1-2_Flg22-1h_Rep2_ATH120798whole plant Dewdney_1-2_Flg22-1h_Rep2_ATH1.CEL
Treatment: Flg22, final concentration 1 uM, was added to the medium on day 10.
Dewdney_1-3_Flg22-1h_Rep3_ATH120799whole plant Dewdney_1-3_Flg22-1h_Rep3_ATH1.CEL
Treatment: Flg22, final concentration 1 uM, was added to the medium on day 10.
Dewdney_1-4_Flg22-3h_Rep1_ATH120800whole plant Dewdney_1-4_Flg22-3h Rep1_ATH1.CEL
Treatment: Flg22, final concentration 1 uM, was added to the medium on day 10.
Dewdney_1-5_Flg22-3h_Rep2_ATH120801whole plant Dewdney_1-5_Flg22-3h_Rep2_ATH1.CEL
Treatment: Flg22, final concentration 1 uM, was added to the medium on day 10.
Dewdney_1-6_Flg22-3h_Rep3_ATH120802whole plant Dewdney_1-6_Flg22-3h_Rep3_ATH1.CEL
Treatment: Flg22, final concentration 1 uM, was added to the medium on day 10.
Dewdney_1-7_H20-1h_Rep1_ATH120803whole plant Dewdney_1-7_H2O-1h_Rep1_ATH1.CEL
Treatment: water was added to the medium on day 10
Dewdney_1-8_H20-1h_Rep2_ATH120804whole plant Dewdney_1-8_H2O-1h_Rep2_ATH1.CEL
Treatment: water was added to the medium on day 10
Dewdney_1-9_H20-1h_Rep3_ATH120805whole plant Dewdney_1-9_H2O-1h_Rep3_ATH1.CEL
Treatment: water was added to the medium on day 10