NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Title:Group II-A WRKY transcription factors and early leaf senescence
Description:In our laboratory we are interested in studying the functions of WRKY zinc finger type transcription factors. There are 74 members of this gene family in Arabidopsis. WRKY factors are key regulators of distinct plant defense responses and are involved in certain developmental programs e.g. trichome development and plant leaf senescence. We would like to determine the functions of a small sub-group (group II-a) of WRKY factors in response to bacterial infection. Our aim is to compare and contrast the gene expression profiles of 3-week-old wild type and WRKY T-DNA knockout mutants grown in a growth chamber under long day growth conditions and subsequently challenged for 6 hours with the virulent bacterial pathogen /Pseudomonas syringae/ DC3000.
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
Ulker_2-1_WT-Col-0-L-MgCl2_Rep1_ATH120684Entire rosette Ulker_2-1_WT-Col-0-L-MgCl2_Rep1_ATH1.CEL
Ulker_2-2_WRKY-KO-02-Pst-DC3000_Rep1_ATH120685Entire rosette Ulker_2-2_WRKY-KO-02-Pst-DC3000_Rep1_ATH1.CEL
Ulker_2-3_WRKY-KO-07-Pst-DC3000_Rep1_ATH120686Entire rosette Ulker_2-3_WRKY-KO-07-Pst-DC3000_Rep1_ATH1.CEL
Ulker_2-4_WRKY-KO-30-Pst-DC3000_Rep1_ATH120687Entire rosette Ulker_2-4_WRKY-KO-30-Pst-DC3000_Rep1_ATH1.CEL
Ulker_2-5_WRKY-KO-40-Pst-DC3000_Rep1_ATH120688Entire rosette Ulker_2-5_WRKY-KO-40-Pst-DC3000_Rep1_ATH1.CEL
Ulker_2-6_WRKY-KO-13-Pst-DC3000_Rep1_ATH120689Entire rosette Ulker_2-6_WRKY-KO-13-Pst-DC3000_Rep1_ATH1.CEL
Ulker_2-7_WT-Col-0-L-Pst-DC3000_Rep1_ATH120690Entire rosette Ulker_2-7_WT-Col-0-L-Pst-DC3000_Rep1_ATH1.CEL