NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Title:Transcriptome response to change in ploidy level in Arabidopsis
Description:By reciprocally crossing 2x and 4x C24 ecotype plants, we have generated 4 types of offspring with various ploidy (2x; 3x; 4x) or parent-of-origin genome dosage (3x from 4xper2x; 3x from 2xper4x). For each offspring generated, total RNA was extracted using Trizol from 8 seedlings 9 days after germination (developmental stage1.02, 2 leaves).Sample names:DIP diploidTET tetraploidTFE triploid female excessTME triplod male excess
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
Garnier_1-10_C24-TET_Rep1_ATH14040whole plant N906Garnier_1-10_C24-TET_Rep1_ATH1.CEL
Garnier_1-11_C24-TET_Rep2_ATH14041whole plant N906Garnier_1-11_C24-TET_Rep2_ATH1.CEL
Garnier_1-12_C24-TET_Rep3_ATH14042whole plant N906Garnier_1-12_C24-TET_Rep3_ATH1.CEL
Garnier_1-1_C24-DIP_Rep1_ATH14031whole plant N906Garnier_1-1_C24-DIP_Rep1_ATH1.CEL
Garnier_1-2_C24-DIP_Rep2_ATH14032whole plant N906Garnier_1-2_C24-DIP_Rep2_ATH1.CEL
Garnier_1-4_C24-TFE_Rep1_ATH14034whole plant N906Garnier_1-4_C24-TFE_Rep1_ATH1.CEL
Garnier_1-5_C24-TFE_Rep2_ATH14035whole plant N906Garnier_1-5_C24-TFE_Rep2_ATH1.CEL
Garnier_1-6_C24-TFE_Rep3_ATH14036whole plant N906Garnier_1-6_C24-TFE_Rep3_ATH1.CEL
Garnier_1-7_C24-TME_Rep1_ATH14037whole plant N906Garnier_1-7_C24-TME_Rep1_ATH1.CEL
Garnier_1-8_C24-TME_Rep2_ATH14038whole plant N906Garnier_1-8_C24-TME_Rep2_ATH1.CEL
Garnier_1-9_C24-TME_Rep3_ATH14039whole plant N906Garnier_1-9_C24-TME_Rep3_ATH1.CEL