NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Experiment:	329
Title:	Gene Expression During Recovery from Freezing
Date:	2005-11-04
Description:	Freezing causes physiological changes even in a hardy, cold-acclimated wild type. During recovery from freezing, gene expression will reflect the induction of damage-repair processes distinct from the damage-prevention associated with cold acclimation. This will be detected by observing the wild-type transcriptome at two time points during recovery from a freezing episode. The appropriate control is the unfrozen, cold-acclimated wild type.
ftp Link:	ftp Link

Slide Information:

Slide ID	Slide Name	Tissue	Stock Code	Cel File
Thorlby_1-1_cold-acclimated_REP3_ATH1	3845	all aerial parts	N1092	Thorlby_1-1_cold-acclimated_REP3_ATH1.CEL
Thorlby_1-1_cold-acclimated_REP3_ATH1	Treatment: For cold acclimation plants were transferred to a growth room at 4Â°C with a 9/15 hour day/night cycle. Material was harvested after 11 days of growth at hour 5 of the light cycle (cold acclimated control). At the end of the light cycle plants were frozen at 6.0Â°C for 20 hours, then placed at 20Â°C in the dark for 3 hours, at which time a sample was collected. Plants were left in the dark at 20Â°C for a total of 24 hours at which time a second sample was collected.
Thorlby_1-2_3h-post-freeze_REP3_ATH1	3846	all aerial parts	N1092	Thorlby_1-2_3h-post-freeze_REP3_ATH1.CEL
Thorlby_1-2_3h-post-freeze_REP3_ATH1	Treatment: For cold acclimation plants were transferred to a growth room at 4Â°C with a 9/15 hour day/night cycle. Material was harvested after 11 days of growth at hour 5 of the light cycle (cold acclimated control). At the end of the light cycle plants were frozen at 6.0Â°C for 20 hours, then placed at 20Â°C in the dark for 3 hours, at which time a sample was collected. Plants were left in the dark at 20Â°C for a total of 24 hours at which time a second sample was collected.
Thorlby_1-3_24h-post-freeze_REP3_ATH1	3847	all aerial parts	N1092	Thorlby_1-3_24hr-post-freeze_REP3_ATH1.CEL
Thorlby_1-3_24h-post-freeze_REP3_ATH1	Treatment: For cold acclimation plants were transferred to a growth room at 4Â°C with a 9/15 hour day/night cycle. Material was harvested after 11 days of growth at hour 5 of the light cycle (cold acclimated control). At the end of the light cycle plants were frozen at 6.0Â°C for 20 hours, then placed at 20Â°C in the dark for 3 hours, at which time a sample was collected. Plants were left in the dark at 20Â°C for a total of 24 hours at which time a second sample was collected.