NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Experiment:321
Title:Comparative ABA-treatment of Col-O vector control and transgenic plants
Date:2006-01-03
Description:The aim of this experiment is to understand the impact of overexpression of ERD15 on the transcriptome of Arabidopsis thaliana. ERD15 was isolated from a screen for genes rapidly induced after pathogen treatment from Arabidopsis. This gene was originally found as early responsive to drought (Kiyosue et al., 1994, Plant Physiol 106, 1707). ABA is central phytohormone in drought response, but increasing information is pointing to its significant role in pathogen responses as well. We are interested to see the effect of this hormone on plants overexpressing ERD15 compared to control plants. The samples (rosette leaves)will be harvested from 3-week old soil grown plants 90 min after spraying with 100 micromolar ABA. Comparison will be made with non-treated plant samples.
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
Helenius_1-1_control-non-treated_Rep1_ATH13784Col-0rosette leaves Helenius_1-1_control-non-treated_Rep1_ATH1.CEL
Treatment: The plants were sprayed with distilled water containing 0,07% EtOH (=control for ABA treatment). The samples were collected after 90 min
Helenius_1-2_control-ABA-treated_Rep1_ATH13785Col-0rosette leaves Helenius_1-2_control-ABA-treated_Rep1_ATH1.CEL
Treatment: ABA-treated: The plants were sprayed with 100 microM ABA (diluted in distilled water, stock solution of ABA in 70%EtOH, so the final concentration of EtHO is 0,07%). The samples were collected after 90 min. Rosette leaves from three plants were pooled.
Helenius_1-3_ERD15-oex-non-treated_Rep1_ATH13786Col-0 (At2g41430)rosette leaves Helenius_1-3_ERD15-oex-non-treated_Rep1_ATH1.CEL
Treatment: oex-non-treated: The plants were sprayed with distilled water containing 0,07% EtOH (=control for ABA treatment). The samples were collected after 90 min. Rosette leaves from three plants were pooled.
Helenius_1-4_ERD15 oex-ABA-treated_Rep1_ATH13787Col-0 (At2g41430)rosette leaves Helenius_1-4_ERD15-oex-ABA-treated_Rep1_ATH1.CEL
Treatment: oex-ABA-treated: The plants were sprayed with 100 microM ABA (diluted in distilled water, stock solution of ABA in 70%EtOH, so the final concentration of EtOH is 0,07%). The samples were collected after 90 min. Rosette leaves from three plants were pooled.