NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Experiment:185
Title:AtGenExpress:Effect of gibberellic acid inhibitors on seedlings
Date:2005-02-02
Description:AtGenExpress: A multinational coordinated effort to uncover the transcriptome of the multicellular model organism Arabidopsis thaliana The activity of genes and their encoded products can be regulated in several ways, but transcription is the primary level, since all other modes of regulation (RNA splicing, RNA and protein stability, etc.) are dependent on a gene being transcribed in the first place. The importance of transcriptional regulation has been underscored by the recent flood of global expression analyses, which have confirmed that transcriptional co-regulation of genes that act together is the norm, not the exception. Moreover, many studies suggest that evolutionary change is driven in large part by modifications of transcriptional programs. An essential first step toward deciphering the transcriptional code is to determine the expression pattern of all genes. With this goal in mind, an international effort to develop a gene expression atlas of Arabidopsis has been underway since fall 2003. This project, dubbed AtGenExpress, is funded by the DFG, and will provide the Arabidopsis community with access to a large set of Affymetrix microarray data. As part of this collaboration, we have generated expression data from 80 biologicaly different samples in triplicate.Wild-type seedlings were treated with inhibitors of gibberellic acid biosynthesis.
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
RIKEN-GODA11A22975complete plant N1092RIKENGODA11A2.cel
Treatment: 10uM paclobutrazol (GA biosynthesis inhibitor) for 3h
RIKEN-GODA11B22976complete plant N1092RIKENGODA11B2.cel
Treatment: 10uM paclobutrazol (GA biosynthesis inhibitor) for 3h
RIKEN-GODA12A22977complete plant N1092RIKENGODA12A2.cel
Treatment: 10uM paclobutrazol (GA biosynthesis inhibitor) for 12h
RIKEN-GODA12B22978complete plant N1092RIKENGODA12B2.cel
Treatment: 10uM paclobutrazol (GA biosynthesis inhibitor) for 12h
RIKEN-GODA13A22979complete plant N1092RIKENGODA13A2.cel
Treatment: 10uM prohexadione (GA biosynthesis inhibitor) for 3h
RIKEN-GODA13B22980complete plant N1092RIKENGODA13B2.cel
Treatment: 10uM prohexadione (GA biosynthesis inhibitor) for 3h
RIKEN-GODA14A22981complete plant N1092RIKENGODA14A2.cel
Treatment: 10uM prohexadione (GA biosynthesis inhibitor) for 12h
RIKEN-GODA14B22982complete plant N1092RIKENGODA14B2.cel
Treatment: 10uM prohexadione (GA biosynthesis inhibitor) for 12h
RIKEN-GODA1A22983complete plant N1092RIKENGODA1A2.cel
Treatment: mock treatment for 3h
RIKEN-GODA1B22984complete plant N1092RIKENGODA1B2.cel
Treatment: mock treatment for 3h
RIKEN-GODA2A22985complete plant N1092RIKENGODA2A2.cel
Treatment: mock treatment for 12h
RIKEN-GODA2B22986complete plant N1092RIKENGODA2B2.cel
Treatment: mock treatment for 12h
RIKEN-GODA3A22987complete plant N1092RIKENGODA3A2.cel
Treatment: 10uM propiconazole (GA biosynthesis inhibitor) for 3h
RIKEN-GODA3B22988complete plant N1092RIKENGODA3B2.cel
Treatment: 10uM propiconazole (GA biosynthesis inhibitor) for 3h
RIKEN-GODA4A22989complete plant N1092RIKENGODA4A2.cel
Treatment: 10uM propiconazole (GA biosynthesis inhibitor) for 12h
RIKEN-GODA4B22990complete plant N1092RIKENGODA4B2.cel
Treatment: 10uM propiconazole (GA biosynthesis inhibitor) for 12h
RIKEN-GODA5A22991complete plant N1092RIKENGODA5A2.cel
Treatment: 10uM uniconazole (GA biosynthesis inhibitor) for 3h
RIKEN-GODA5B22992complete plant N1092RIKENGODA5B2.cel
Treatment: 10uM uniconazole (GA biosynthesis inhibitor) for 3h
RIKEN-GODA6A22993complete plant N1092RIKENGODA6A2.cel
Treatment: 10uM uniconazole (GA biosynthesis inhibitor) for 12h
RIKEN-GODA6B22994complete plant N1092RIKENGODA6B2.cel
Treatment: 10uM uniconazole (GA biosynthesis inhibitor) for 12h