NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Experiment:170
Title:AtGenExpress:Different temperature treatment of seeds
Date:2005-02-02
Description:AtGenExpress: A multinational coordinated effort to uncover the transcriptome of the multicellular model organism Arabidopsis thaliana The activity of genes and their encoded products can be regulated in several ways, but transcription is the primary level, since all other modes of regulation (RNA splicing, RNA and protein stability, etc.) are dependent on a gene being transcribed in the first place. The importance of transcriptional regulation has been underscored by the recent flood of global expression analyses, which have confirmed that transcriptional co-regulation of genes that act together is the norm, not the exception. Moreover, many studies suggest that evolutionary change is driven in large part by modifications of transcriptional programs. An essential first step toward deciphering the transcriptional code is to determine the expression pattern of all genes. With this goal in mind, an international effort to develop a gene expression atlas of Arabidopsis has been underway since fall 2003. This project, dubbed AtGenExpress, is funded by the DFG, and will provide the Arabidopsis community with access to a large set of Affymetrix microarray data. As part of this collaboration, we have generated expression data from 80 biologicaly different samples in triplicate.Wild-type seeds were treated at 22 C and 4 C
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
RIKEN-YAMAUCHI1A2769seeds NW20RIKENYAMAUCHI1A.cel
Treatment: incubated for 96 hours in the dark at 22C
RIKEN-YAMAUCHI1B2770seeds NW20RIKENYAMAUCHI1B.cel
Treatment: incubated for 96 hours in the dark at 22C
RIKEN-YAMAUCHI2A2771seeds NW20RIKENYAMAUCHI2A.cel
Treatment: incubated for 96 hours in the dark at 4C
RIKEN-YAMAUCHI2B2772seeds NW20RIKENYAMAUCHI2B.cel
Treatment: incubated for 96 hours in the dark at 4C