NASCArrays Information at The BAR
NASCArrays Information at The BAR
Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed
from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the
experiment number. To download the CEL files, please click on the ftp link.
| Experiment: | 149 |
| Title: | AtGenExpress:Developmental series (seedlings and whole plants) |
| Date: | 2004-07-09 |
| Description: | AtGenExpress: A multinational coordinated effort to uncover the transcriptome of the multicellular model organism Arabidopsis thaliana.The activity of genes and their encoded products can be regulated in several ways, but transcription is the primary level, since all other modes of regulation (RNA splicing, RNA and protein stability, etc.) are dependent on a gene being transcribed in the first place. The importance of transcriptional regulation has been underscored by the recent flood of global expression analyses, which have confirmed that transcriptional co-regulation of genes that act together is the norm, not the exception. Moreover, many studies suggest that evolutionary change is driven in large part by modifications of transcriptional programs. An essential first step toward deciphering the transcriptional code is to determine the expression pattern of all genes. With this goal in mind, an international effort to develop a gene expression atlas of Arabidopsis has been underway since fall 2003. This project, dubbed AtGenExpress, is funded by the DFG, and will provide the Arabidopsis community with access to a large set of Affymetrix microarray data. As part of this collaboration, we have generated expression data from 80 biologicaly different samples in triplicate. The focus of this data set is on different tissues and different developmental stages in wild type Columbia (Col-0) and various mutants. |
| ftp Link: | ftp Link |
| Slide ID | Slide Name | Genetic Background | Tissue | Stock Code | Cel File |
|---|---|---|---|---|---|
| ATGE_100_A | 1345 | seedling, green parts | ATGE_100_A.CEL | ||
| ATGE_100_B | 1346 | seedling, green parts | ATGE_100_B.CEL | ||
| ATGE_100_C | 1347 | seedling, green parts | ATGE_100_C.CEL | ||
| ATGE_101_A | 1348 | seedling, green parts | ATGE_101_A.CEL | ||
| ATGE_101_B | 1349 | seedling, green parts | ATGE_101_B.CEL | ||
| ATGE_101_C | 1350 | seedling, green parts | ATGE_101_C.CEL | ||
| ATGE_22_A | 1177 | developmental drift; whole plant after transition, but before bolting | ATGE_22_A.CEL | ||
| ATGE_22_B | 1178 | developmental drift; whole plant after transition, but before bolting | ATGE_22_B.CEL | ||
| ATGE_22_C | 1179 | developmental drift; whole plant after transition, but before bolting | ATGE_22_C.CEL | ||
| ATGE_23_A | 1180 | developmental drift; whole plant after transition, but before bolting | ATGE_23_A.CEL | ||
| ATGE_23_B | 1181 | developmental drift; whole plant after transition, but before bolting | ATGE_23_B.CEL | ||
| ATGE_23_C | 1182 | developmental drift; whole plant after transition, but before bolting | ATGE_23_C.CEL | ||
| ATGE_24_A | 1183 | developmental drift; whole plant after transition, but before bolting | ATGE_24_A.CEL | ||
| ATGE_24_B | 1184 | developmental drift; whole plant after transition, but before bolting | ATGE_24_B.CEL | ||
| ATGE_24_C | 1185 | developmental drift; whole plant after transition, but before bolting | ATGE_24_C.CEL | ||
| ATGE_7_A2 | 1132 | seedling, green parts | ATGE_7_A2.CEL | ||
| ATGE_7_B2 | 1133 | seedling, green parts | ATGE_7_B2.CEL | ||
| ATGE_7_C2 | 1134 | seedling, green parts | ATGE_7_C2.CEL | ||
| ATGE_96_A | 1333 | seedling, green parts | ATGE_96_A.CEL | ||
| ATGE_96_B | 1334 | seedling, green parts | ATGE_96_B.CEL | ||
| ATGE_96_C | 1335 | seedling, green parts | ATGE_96_C.CEL | ||
| ATGE_97_A | 1336 | seedling, green parts | ATGE_97_A.CEL | ||
| ATGE_97_B | 1337 | seedling, green parts | ATGE_97_B.CEL | ||
| ATGE_97_C | 1338 | seedling, green parts | ATGE_97_C.CEL |