NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Experiment:105
Title:Differential gene expression patterns in potassium-starved and Caesium-treated plants
Date:2004-06-14
Description:At high concentrations ceasium (Cs) is toxic to plant growth. This toxic effect may occur when Cs blocks potassium (K) uptake mechanisms in plants. Consequently, plants starved of K and plants exposed to toxic concentrations of Cs should have similar gene expression patterns. To test this hypothesis, Arabidopsis will initially be grown on agar containing 1/10 MS salts before being transferred to either 1/10 MS nutrient solution (control plants), 1/10 MS nutrient solution containing 2 mM Cs, or 1/10 MS nutrient solution with no K. Roots and shoot will then be harvested seven days after transfer and used to challenge ATH1 GeneChips.
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
Hammond_3-10_Control-root_Rep2_ATH11048all root material N1601Hammond_3-10_Control-root_Rep2_ATH1.cel
Hammond_3-11_Potassium-starved-root_Rep2_ATH11046all root material N1601Hammond_3-11_Potassium-starved-root_Rep2_ATH1.cel
Hammond_3-12_Caesium-treated-root_Rep2_ATH11047all root material N1601Hammond_3-12_Caesium-treated-root_Rep2_ATH1.cel
Hammond_3-13_Control-shoot_Rep3_ATH11024shoots N1601Hammond_3-13_Control-shoot_Rep3_ATH1.cel
Hammond_3-14_Potassium-starved-shoot_Rep3_ATH11025shoots N1601Hammond_3-14_Potassium-starved-shoot_Rep3_ATH1.cel
Hammond_3-15_Caesium-treated-shoot_Rep3_ATH11026shoots N1601Hammond_3-15_Caesium-treated-shoot_Rep3_ATH1.cel
Hammond_3-16_Control-root_Rep3_ATH11027all root material N1601Hammond_3-16_Control-root_Rep3_ATH1.cel
Hammond_3-17_Potassium-starved-root_Rep3_ATH11028all root material N1601Hammond_3-17_Potassium-starved-root_Rep3_ATH1.cel
Hammond_3-18_Caesium-treated-root_Rep3_ATH11029all root material N1601Hammond_3-18_Caesium-treated-root_Rep3_ATH1.cel
Hammond_3-1_Control-shoot_Rep1_ATH11015shoots N1601Hammond_3-1_Control-shoot_Rep1_ATH1.cel
Hammond_3-2_Potassium-starved-shoot_Rep1_ATH11016shoots N1601Hammond_3-2_Potassium-starved-shoot_Rep1_ATH1.cel
Hammond_3-3_Caesium-treated-shoot_Rep1_ATH11017shoots N1601Hammond_3-3_Caesium-treated-shoot_Rep1_ATH1.cel
Hammond_3-4_Control-root_Rep1_ATH11018all root material N1601Hammond_3-4_Control-root_Rep1_ATH1.cel
Hammond_3-5_Potassium-starved-root_Rep1_ATH11019all root material N1601Hammond_3-5_Potassium-starved-root_Rep1_ATH1.cel
Hammond_3-6_Caesium-treated-root_Rep1_ATH11020all root material N1601Hammond_3-6_Caesium-treated-root_Rep1_ATH1.cel
Hammond_3-7_Control-shoot_Rep2_ATH11021shoots N1601Hammond_3-7_Control-shoot_Rep2_ATH1.cel
Hammond_3-8_Potassium-starved-shoot_Rep2_ATH11022shoots N1601Hammond_3-8_Potassium-starved-shoot_Rep2_ATH1.cel
Hammond_3-9_Caesium-treated-shoot_Rep2_ATH11023shoots N1601Hammond_3-9_Caesium-treated-shoot_Rep2_ATH1.cel