NASCArrays Information at The BAR

Welcome to NASCArrays information at the BAR. This page hosts meta-information from the NASCArrays service (2002-2013). This information was parsed from text files available on the NASCArrays site. NASCArrays data is on iPlant server. To download experiment data from iPlant, please click on the experiment number. To download the CEL files, please click on the ftp link.

Title:Global gene expression in two species of Brassicaceae:Thlaspi caerulescens and Thlaspi arvense (cro
Description:The aim of this study is to test if Affymetrix ATH1 GeneChips can be used to study global gene expression in two species of Brassicaceae: Thlaspi caerulescens and Thlaspi arvense. These species have been chosen as they have contrasting mineral phenotypes. Plants were grown in a standard potting compost. Seeds were sown on September 16th 2003. Pots were placed in a controlled environment room set to 22°C and 16 h daylength. Plant shoots were harvested on December 12th. Both species had in excess of 20 leaves per plant, but had not produced flowering bolts. RNA was extracted from the entire shoots of Thlaspi caerulescens and Thlaspi arvense plants.
ftp Link:ftp Link

Slide Information:
Slide IDSlide NameGenetic BackgroundTissueStock CodeCel File
Broadley_2-10_arvense_Rep3_ATH11585whole shoot Broadley_2-10_arvense_Rep3_ATH1.cel
Broadley_2-1_caerulescens_Rep1_ATH11013whole shoot Broadley_2-1_caerulescens_Rep1_ATH1.cel
Broadley_2-2_caerulescens_Rep2_ATH11014whole shoot Broadley_2-2_caerulescens_Rep2_ATH1.cel
Broadley_2-3_arvense_Rep1_ATH11011whole shoot Broadley_2-3_arvense_Rep1_ATH1.cel
Broadley_2-4_arvense_Rep2_ATH11012whole shoot MRB001_ATH1_A4-Broadley-Ta2.CEL
Broadley_2-5_caerulescens_Rep1_ATH11580whole shoot Broadley_2-5_caerulescens_Rep1_ATH1.cel
Broadley_2-6_caerulescens_Rep2_ATH11581whole shoot Broadley_2-6_caerulescens_Rep2_ATH1.cel
Broadley_2-7_caerulescens_Rep3_ATH11582whole shoot Broadley_2-7_caerulescens_Rep3_ATH1.cel
Broadley_2-8_arvense_Rep1_ATH11583whole shoot Broadley_2-8_arvense_Rep1_ATH1.cel
Broadley_2-9_arvense_Rep2_ATH11584whole shoot Broadley_2-9_arvense_Rep2_ATH1.cel