BAR News & Other Announcements

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Expression Angler 2016

We have given a complete UX makeover to the our original Expression Angler. Now you can find genes with similar expression patterns by describing the profile you are looking for with a graphic user interface. Try Expression Angler 2016 and let us know what you think!

Gene Slider

Try out our Gene Slider tool for exploring more than 90000 conserved non-coding sequences in the Brassicaceae from Haudry et al. 2013, displayed along with putative transcription factor binding sites from the JASPAR database.

Physcomitrella eFP Browser

We've developed a Pyscomitrella eFP Browser based on gene expression data from Joerg Becker's laboratory, forthcoming in a publication by Ortiz-Ramirez, Hernandez-Coronado et al.

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Gene Expression and Protein Tools

View expression patterns as electronic fluorescent pictographs or heatmaps, explore promoters, identify protein-protein interactions and more.

ePlant

ePlant
(new version beta)
Go!
Legacy ePlant
(PLOS ONE version)
Go! Pub

Arabidopsis eFP Browsers

Arabidopsis eFP Browser
Go! Pub
Cell eFP Browser
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Arabidopsis Seed Coat eFP Browser
Go! Pub
Arabidopsis Translatome eFP Browser
Go!
Arabidopsis Spatio-Temporal Root Stress eFP Browser
Go!

Expression Anglers and other Expression Browsers

Expression Angler 2016
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Legacy Expression Angler
Go! Pub
Poplar Expression Angler
Go!
Sample Angler
Go!
e-Northerns w. Expression Browser
Go! Pub
Poplar Expression Browser
Go!

Other Dicot eFP Browsers

Poplar eFP Browser
Go! Pub Pub
Medicago eFP Browser
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Soybean eFP Browser
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Potato eFP Browser
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Tomato eFP Browser
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E. salsugineum eFP Browser
Go! Pub

Monocot eFP Browsers

Maize eFP Browser
Go! Pub Pub
Rice eFP Browser
Go!
Barley eFP Browser
Go!
Triticale eFP Browser
Go! Pub

Other Gene Expression & Protein Tools

Physcomitrella eFP Browser
Go!
Mouse eFP Browser
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Human eFP Browser
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Expressolog Tree Viewer
Go! Pub
Promomer
Go! Pub
Cistome
Go!
Arabidopsis Interactions Viewer
Go! Pub
Rice Interactions Viewer
Go! Pub
Gene Slider
Go!

Molecular Markers and Mapping Tools

Perform Next Generation Mapping, or generate your own markers using our molecular marker tools.

Next Generation Mapping
Go! Pub
Marker Tracker
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Blast Digester
Go! Pub
CapsID
Go! Pub

Other Genomic Tools and Widgets

Remove duplicates, perform multi-dimensional Venn analyses, or generate random lists of identifiers.

Arabidopsis Citation Network Viewer
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ClustalW with MView Output
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DataMetaFormatter
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Heatmapper
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Heatmapper Plus
Go!
Duplicate Remover
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Venn Selector
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Venn SuperSelector
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Random ID list generator
Go!
AGURR
Go!
Classification Super Viewer
Go! Pub
_at to AGI converter
Go!
MASTA
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GeneMANIA
Go!
Topographic PhyloMap
Go!

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